Protein–RNA interactions for Protein: Q9H0Q0

FAM49A, Protein FAM49A, humanhuman

Predicted RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49AQ9H0Q0 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
FAM49AQ9H0Q0 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
FAM49AQ9H0Q0 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
FAM49AQ9H0Q0 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
FAM49AQ9H0Q0 DUX4L2-201ENST00000561772 1275 ntBASIC24.48■■□□□ 1.51
FAM49AQ9H0Q0 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC24.48■■□□□ 1.51
FAM49AQ9H0Q0 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
FAM49AQ9H0Q0 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC24.48■■□□□ 1.51
FAM49AQ9H0Q0 DUX4L6-201ENST00000626483 1275 ntBASIC24.48■■□□□ 1.51
FAM49AQ9H0Q0 DUX4L1-201ENST00000627662 1275 ntBASIC24.48■■□□□ 1.51
FAM49AQ9H0Q0 DUX4L8-201ENST00000629013 1275 ntBASIC24.48■■□□□ 1.51
FAM49AQ9H0Q0 DUX4L3-201ENST00000630187 1275 ntBASIC24.48■■□□□ 1.51
FAM49AQ9H0Q0 DUX4L7-201ENST00000630678 1275 ntBASIC24.48■■□□□ 1.51
FAM49AQ9H0Q0 DUX4L5-201ENST00000630834 1275 ntBASIC24.48■■□□□ 1.51
FAM49AQ9H0Q0 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
FAM49AQ9H0Q0 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
FAM49AQ9H0Q0 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC24.47■■□□□ 1.51
FAM49AQ9H0Q0 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
FAM49AQ9H0Q0 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
FAM49AQ9H0Q0 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
FAM49AQ9H0Q0 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
FAM49AQ9H0Q0 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
FAM49AQ9H0Q0 AP005435.1-201ENST00000529293 1178 ntBASIC24.47■■□□□ 1.51
FAM49AQ9H0Q0 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
FAM49AQ9H0Q0 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
FAM49AQ9H0Q0 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
FAM49AQ9H0Q0 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
FAM49AQ9H0Q0 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
FAM49AQ9H0Q0 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC24.46■■□□□ 1.51
FAM49AQ9H0Q0 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
FAM49AQ9H0Q0 LHPP-203ENST00000392757 840 ntTSL 3 BASIC24.46■■□□□ 1.51
FAM49AQ9H0Q0 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC24.46■■□□□ 1.51
FAM49AQ9H0Q0 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
FAM49AQ9H0Q0 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
FAM49AQ9H0Q0 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC24.46■■□□□ 1.51
FAM49AQ9H0Q0 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
FAM49AQ9H0Q0 AC004687.1-201ENST00000579003 1625 ntBASIC24.46■■□□□ 1.51
FAM49AQ9H0Q0 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
FAM49AQ9H0Q0 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC24.45■■□□□ 1.5
FAM49AQ9H0Q0 KRT18P5-201ENST00000436075 1291 ntBASIC24.45■■□□□ 1.5
FAM49AQ9H0Q0 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC24.45■■□□□ 1.5
FAM49AQ9H0Q0 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC24.45■■□□□ 1.5
FAM49AQ9H0Q0 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
FAM49AQ9H0Q0 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC24.44■■□□□ 1.5
FAM49AQ9H0Q0 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC24.44■■□□□ 1.5
FAM49AQ9H0Q0 AC123595.1-201ENST00000440769 1046 ntBASIC24.44■■□□□ 1.5
FAM49AQ9H0Q0 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
FAM49AQ9H0Q0 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
FAM49AQ9H0Q0 AL353803.4-201ENST00000565882 1934 ntBASIC24.43■■□□□ 1.5
FAM49AQ9H0Q0 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
FAM49AQ9H0Q0 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
FAM49AQ9H0Q0 IKBKGP1-201ENST00000612193 1073 ntBASIC24.43■■□□□ 1.5
FAM49AQ9H0Q0 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
FAM49AQ9H0Q0 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
FAM49AQ9H0Q0 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
FAM49AQ9H0Q0 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
FAM49AQ9H0Q0 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
FAM49AQ9H0Q0 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
FAM49AQ9H0Q0 H19-210ENST00000439725 1929 ntTSL 2 BASIC24.43■■□□□ 1.5
FAM49AQ9H0Q0 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
FAM49AQ9H0Q0 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
FAM49AQ9H0Q0 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
FAM49AQ9H0Q0 PREB-202ENST00000406567 1910 ntTSL 5 BASIC24.42■■□□□ 1.5
FAM49AQ9H0Q0 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
FAM49AQ9H0Q0 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC24.42■■□□□ 1.5
FAM49AQ9H0Q0 CCDC92B-201ENST00000575506 885 ntBASIC24.42■■□□□ 1.5
FAM49AQ9H0Q0 AC105233.4-201ENST00000642045 216 ntBASIC24.42■■□□□ 1.5
FAM49AQ9H0Q0 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
FAM49AQ9H0Q0 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
FAM49AQ9H0Q0 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
FAM49AQ9H0Q0 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
FAM49AQ9H0Q0 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
FAM49AQ9H0Q0 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
FAM49AQ9H0Q0 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
FAM49AQ9H0Q0 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC24.41■■□□□ 1.5
FAM49AQ9H0Q0 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC24.41■■□□□ 1.5
FAM49AQ9H0Q0 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
FAM49AQ9H0Q0 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC24.41■■□□□ 1.5
FAM49AQ9H0Q0 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC24.41■■□□□ 1.5
FAM49AQ9H0Q0 AC022517.1-201ENST00000592429 346 ntBASIC24.41■■□□□ 1.5
FAM49AQ9H0Q0 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC24.41■■□□□ 1.5
FAM49AQ9H0Q0 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
FAM49AQ9H0Q0 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
FAM49AQ9H0Q0 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
FAM49AQ9H0Q0 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC24.4■■□□□ 1.5
FAM49AQ9H0Q0 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC24.4■■□□□ 1.5
FAM49AQ9H0Q0 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC24.4■■□□□ 1.5
FAM49AQ9H0Q0 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
FAM49AQ9H0Q0 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
FAM49AQ9H0Q0 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
FAM49AQ9H0Q0 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
FAM49AQ9H0Q0 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
FAM49AQ9H0Q0 NT5C3AP1-201ENST00000394500 1012 ntBASIC24.4■■□□□ 1.5
FAM49AQ9H0Q0 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
FAM49AQ9H0Q0 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
FAM49AQ9H0Q0 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
FAM49AQ9H0Q0 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC24.39■■□□□ 1.5
FAM49AQ9H0Q0 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
FAM49AQ9H0Q0 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
FAM49AQ9H0Q0 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC24.39■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms