Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TRIM62Q9BVG3 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TRIM62Q9BVG3 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.11■■□□□ 1.29
TRIM62Q9BVG3 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.11■■□□□ 1.29
TRIM62Q9BVG3 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC23.11■■□□□ 1.29
TRIM62Q9BVG3 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TRIM62Q9BVG3 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TRIM62Q9BVG3 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TRIM62Q9BVG3 AC004687.1-201ENST00000579003 1625 ntBASIC23.11■■□□□ 1.29
TRIM62Q9BVG3 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
TRIM62Q9BVG3 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TRIM62Q9BVG3 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.1■■□□□ 1.29
TRIM62Q9BVG3 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.1■■□□□ 1.29
TRIM62Q9BVG3 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TRIM62Q9BVG3 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TRIM62Q9BVG3 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TRIM62Q9BVG3 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
TRIM62Q9BVG3 BX842568.3-201ENST00000418104 571 ntBASIC23.1■■□□□ 1.29
TRIM62Q9BVG3 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC23.1■■□□□ 1.29
TRIM62Q9BVG3 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.1■■□□□ 1.29
TRIM62Q9BVG3 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC23.1■■□□□ 1.29
TRIM62Q9BVG3 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRIM62Q9BVG3 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.09■■□□□ 1.29
TRIM62Q9BVG3 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TRIM62Q9BVG3 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.09■■□□□ 1.29
TRIM62Q9BVG3 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.09■■□□□ 1.29
TRIM62Q9BVG3 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC23.09■■□□□ 1.29
TRIM62Q9BVG3 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.09■■□□□ 1.29
TRIM62Q9BVG3 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.09■■□□□ 1.29
TRIM62Q9BVG3 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRIM62Q9BVG3 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRIM62Q9BVG3 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.08■■□□□ 1.29
TRIM62Q9BVG3 AC027682.1-201ENST00000562846 899 ntBASIC23.08■■□□□ 1.29
TRIM62Q9BVG3 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TRIM62Q9BVG3 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.29
TRIM62Q9BVG3 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
TRIM62Q9BVG3 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.08■■□□□ 1.29
TRIM62Q9BVG3 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
TRIM62Q9BVG3 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.08■■□□□ 1.28
TRIM62Q9BVG3 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.28
TRIM62Q9BVG3 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
TRIM62Q9BVG3 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRIM62Q9BVG3 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRIM62Q9BVG3 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.07■■□□□ 1.28
TRIM62Q9BVG3 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC23.07■■□□□ 1.28
TRIM62Q9BVG3 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRIM62Q9BVG3 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRIM62Q9BVG3 SNX3-202ENST00000349379 890 ntTSL 2 BASIC23.07■■□□□ 1.28
TRIM62Q9BVG3 MIR638-201ENST00000385237 100 ntBASIC23.07■■□□□ 1.28
TRIM62Q9BVG3 MTURN-203ENST00000409688 843 ntTSL 2 BASIC23.07■■□□□ 1.28
TRIM62Q9BVG3 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.07■■□□□ 1.28
TRIM62Q9BVG3 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.07■■□□□ 1.28
TRIM62Q9BVG3 AC068587.7-201ENST00000641602 218 ntBASIC23.07■■□□□ 1.28
TRIM62Q9BVG3 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRIM62Q9BVG3 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRIM62Q9BVG3 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.07■■□□□ 1.28
TRIM62Q9BVG3 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TRIM62Q9BVG3 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC23.06■■□□□ 1.28
TRIM62Q9BVG3 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
TRIM62Q9BVG3 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRIM62Q9BVG3 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRIM62Q9BVG3 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TRIM62Q9BVG3 AC233992.3-201ENST00000607491 485 ntBASIC23.06■■□□□ 1.28
TRIM62Q9BVG3 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TRIM62Q9BVG3 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TRIM62Q9BVG3 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRIM62Q9BVG3 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.05■■□□□ 1.28
TRIM62Q9BVG3 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TRIM62Q9BVG3 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.05■■□□□ 1.28
TRIM62Q9BVG3 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC23.05■■□□□ 1.28
TRIM62Q9BVG3 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.05■■□□□ 1.28
TRIM62Q9BVG3 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.05■■□□□ 1.28
TRIM62Q9BVG3 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
TRIM62Q9BVG3 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TRIM62Q9BVG3 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
TRIM62Q9BVG3 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.05■■□□□ 1.28
TRIM62Q9BVG3 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.05■■□□□ 1.28
TRIM62Q9BVG3 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
TRIM62Q9BVG3 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TRIM62Q9BVG3 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TRIM62Q9BVG3 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TRIM62Q9BVG3 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.04■■□□□ 1.28
TRIM62Q9BVG3 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.04■■□□□ 1.28
TRIM62Q9BVG3 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.04■■□□□ 1.28
TRIM62Q9BVG3 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRIM62Q9BVG3 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRIM62Q9BVG3 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC23.04■■□□□ 1.28
TRIM62Q9BVG3 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC23.04■■□□□ 1.28
TRIM62Q9BVG3 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TRIM62Q9BVG3 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.04■■□□□ 1.28
TRIM62Q9BVG3 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.04■■□□□ 1.28
TRIM62Q9BVG3 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM62Q9BVG3 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM62Q9BVG3 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM62Q9BVG3 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM62Q9BVG3 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM62Q9BVG3 SLC47A1P1-202ENST00000449666 945 ntBASIC23.03■■□□□ 1.28
TRIM62Q9BVG3 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
TRIM62Q9BVG3 AC091305.1-201ENST00000479476 895 ntBASIC23.03■■□□□ 1.28
TRIM62Q9BVG3 AP001330.3-201ENST00000520123 633 ntBASIC23.03■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms