Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHRDL1Q9BU40 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRDL1Q9BU40 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRDL1Q9BU40 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRDL1Q9BU40 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CHRDL1Q9BU40 AC009299.2-201ENST00000482477 511 ntBASIC17.49■□□□□ 0.39
CHRDL1Q9BU40 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC17.49■□□□□ 0.39
CHRDL1Q9BU40 KRT125P-201ENST00000546827 989 ntBASIC17.49■□□□□ 0.39
CHRDL1Q9BU40 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRDL1Q9BU40 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CHRDL1Q9BU40 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHRDL1Q9BU40 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRDL1Q9BU40 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.49■□□□□ 0.39
CHRDL1Q9BU40 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHRDL1Q9BU40 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRDL1Q9BU40 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRDL1Q9BU40 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHRDL1Q9BU40 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CHRDL1Q9BU40 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CHRDL1Q9BU40 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CHRDL1Q9BU40 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRDL1Q9BU40 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRDL1Q9BU40 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC17.48■□□□□ 0.39
CHRDL1Q9BU40 AC239859.2-201ENST00000444165 318 ntBASIC17.48■□□□□ 0.39
CHRDL1Q9BU40 Z92544.1-202ENST00000571933 1220 ntBASIC17.48■□□□□ 0.39
CHRDL1Q9BU40 AC092028.1-203ENST00000608262 953 ntBASIC17.48■□□□□ 0.39
CHRDL1Q9BU40 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRDL1Q9BU40 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC17.48■□□□□ 0.39
CHRDL1Q9BU40 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC17.48■□□□□ 0.39
CHRDL1Q9BU40 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRDL1Q9BU40 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CHRDL1Q9BU40 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHRDL1Q9BU40 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRDL1Q9BU40 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRDL1Q9BU40 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRDL1Q9BU40 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRDL1Q9BU40 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CHRDL1Q9BU40 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC17.47■□□□□ 0.39
CHRDL1Q9BU40 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRDL1Q9BU40 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.47■□□□□ 0.39
CHRDL1Q9BU40 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC17.47■□□□□ 0.39
CHRDL1Q9BU40 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC17.47■□□□□ 0.39
CHRDL1Q9BU40 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC17.47■□□□□ 0.39
CHRDL1Q9BU40 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRDL1Q9BU40 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CHRDL1Q9BU40 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC17.47■□□□□ 0.39
CHRDL1Q9BU40 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
CHRDL1Q9BU40 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRDL1Q9BU40 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CHRDL1Q9BU40 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRDL1Q9BU40 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.47■□□□□ 0.39
CHRDL1Q9BU40 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC17.47■□□□□ 0.39
CHRDL1Q9BU40 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHRDL1Q9BU40 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CHRDL1Q9BU40 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
CHRDL1Q9BU40 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHRDL1Q9BU40 DUSP8P3-201ENST00000399571 1760 ntBASIC17.46■□□□□ 0.39
CHRDL1Q9BU40 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRDL1Q9BU40 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRDL1Q9BU40 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHRDL1Q9BU40 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRDL1Q9BU40 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRDL1Q9BU40 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRDL1Q9BU40 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC17.46■□□□□ 0.39
CHRDL1Q9BU40 MIR4787-201ENST00000607364 84 ntBASIC17.46■□□□□ 0.39
CHRDL1Q9BU40 MIR6722-201ENST00000617286 78 ntBASIC17.46■□□□□ 0.39
CHRDL1Q9BU40 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC17.46■□□□□ 0.39
CHRDL1Q9BU40 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRDL1Q9BU40 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRDL1Q9BU40 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC17.46■□□□□ 0.39
CHRDL1Q9BU40 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC17.46■□□□□ 0.39
CHRDL1Q9BU40 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRDL1Q9BU40 LINC00526-201ENST00000581067 1875 ntBASIC17.46■□□□□ 0.38
CHRDL1Q9BU40 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC17.46■□□□□ 0.38
CHRDL1Q9BU40 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
CHRDL1Q9BU40 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC17.45■□□□□ 0.38
CHRDL1Q9BU40 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRDL1Q9BU40 STK25-234ENST00000535007 2459 ntTSL 2 BASIC17.45■□□□□ 0.38
CHRDL1Q9BU40 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHRDL1Q9BU40 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CHRDL1Q9BU40 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRDL1Q9BU40 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CHRDL1Q9BU40 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CHRDL1Q9BU40 EP400NL-214ENST00000641289 2402 ntBASIC17.45■□□□□ 0.38
CHRDL1Q9BU40 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRDL1Q9BU40 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
CHRDL1Q9BU40 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CHRDL1Q9BU40 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRDL1Q9BU40 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CHRDL1Q9BU40 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRDL1Q9BU40 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
CHRDL1Q9BU40 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHRDL1Q9BU40 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CHRDL1Q9BU40 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHRDL1Q9BU40 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHRDL1Q9BU40 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRDL1Q9BU40 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CHRDL1Q9BU40 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC17.44■□□□□ 0.38
CHRDL1Q9BU40 AC079630.1-202ENST00000618127 1840 ntBASIC17.44■□□□□ 0.38
CHRDL1Q9BU40 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms