Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CDK5RAP2Q96SN8 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC26.39■■□□□ 1.82
CDK5RAP2Q96SN8 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC26.39■■□□□ 1.82
CDK5RAP2Q96SN8 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CDK5RAP2Q96SN8 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC26.39■■□□□ 1.82
CDK5RAP2Q96SN8 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
CDK5RAP2Q96SN8 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
CDK5RAP2Q96SN8 AC092068.2-201ENST00000590491 1708 ntBASIC26.39■■□□□ 1.81
CDK5RAP2Q96SN8 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
CDK5RAP2Q96SN8 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
CDK5RAP2Q96SN8 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CDK5RAP2Q96SN8 AP005435.1-201ENST00000529293 1178 ntBASIC26.38■■□□□ 1.81
CDK5RAP2Q96SN8 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC26.38■■□□□ 1.81
CDK5RAP2Q96SN8 AL354811.1-201ENST00000610286 706 ntBASIC26.38■■□□□ 1.81
CDK5RAP2Q96SN8 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
CDK5RAP2Q96SN8 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CDK5RAP2Q96SN8 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
CDK5RAP2Q96SN8 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC26.38■■□□□ 1.81
CDK5RAP2Q96SN8 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
CDK5RAP2Q96SN8 KRT18P14-201ENST00000534205 1250 ntBASIC26.38■■□□□ 1.81
CDK5RAP2Q96SN8 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC26.38■■□□□ 1.81
CDK5RAP2Q96SN8 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CDK5RAP2Q96SN8 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CDK5RAP2Q96SN8 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC26.38■■□□□ 1.81
CDK5RAP2Q96SN8 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC26.38■■□□□ 1.81
CDK5RAP2Q96SN8 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
CDK5RAP2Q96SN8 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CDK5RAP2Q96SN8 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CDK5RAP2Q96SN8 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CDK5RAP2Q96SN8 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC26.37■■□□□ 1.81
CDK5RAP2Q96SN8 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC26.37■■□□□ 1.81
CDK5RAP2Q96SN8 NT5C3AP1-201ENST00000394500 1012 ntBASIC26.37■■□□□ 1.81
CDK5RAP2Q96SN8 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC26.37■■□□□ 1.81
CDK5RAP2Q96SN8 MIR6084-201ENST00000622012 110 ntBASIC26.37■■□□□ 1.81
CDK5RAP2Q96SN8 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CDK5RAP2Q96SN8 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC26.37■■□□□ 1.81
CDK5RAP2Q96SN8 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
CDK5RAP2Q96SN8 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CDK5RAP2Q96SN8 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CDK5RAP2Q96SN8 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
CDK5RAP2Q96SN8 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CDK5RAP2Q96SN8 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CDK5RAP2Q96SN8 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC26.36■■□□□ 1.81
CDK5RAP2Q96SN8 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC26.36■■□□□ 1.81
CDK5RAP2Q96SN8 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC26.36■■□□□ 1.81
CDK5RAP2Q96SN8 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC26.36■■□□□ 1.81
CDK5RAP2Q96SN8 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CDK5RAP2Q96SN8 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC26.35■■□□□ 1.81
CDK5RAP2Q96SN8 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CDK5RAP2Q96SN8 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC26.35■■□□□ 1.81
CDK5RAP2Q96SN8 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC26.35■■□□□ 1.81
CDK5RAP2Q96SN8 YBX1P1-201ENST00000445822 960 ntBASIC26.34■■□□□ 1.81
CDK5RAP2Q96SN8 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC26.34■■□□□ 1.81
CDK5RAP2Q96SN8 TPRG1LP1-201ENST00000598702 760 ntBASIC26.34■■□□□ 1.81
CDK5RAP2Q96SN8 STX4-202ENST00000394998 1498 ntTSL 2 BASIC26.34■■□□□ 1.81
CDK5RAP2Q96SN8 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CDK5RAP2Q96SN8 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
CDK5RAP2Q96SN8 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC26.34■■□□□ 1.81
CDK5RAP2Q96SN8 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC26.34■■□□□ 1.81
CDK5RAP2Q96SN8 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC26.34■■□□□ 1.81
CDK5RAP2Q96SN8 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CDK5RAP2Q96SN8 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CDK5RAP2Q96SN8 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC26.33■■□□□ 1.81
CDK5RAP2Q96SN8 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
CDK5RAP2Q96SN8 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CDK5RAP2Q96SN8 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC26.33■■□□□ 1.81
CDK5RAP2Q96SN8 IKBKGP1-201ENST00000612193 1073 ntBASIC26.33■■□□□ 1.81
CDK5RAP2Q96SN8 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC26.33■■□□□ 1.81
CDK5RAP2Q96SN8 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CDK5RAP2Q96SN8 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
CDK5RAP2Q96SN8 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CDK5RAP2Q96SN8 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC26.32■■□□□ 1.8
CDK5RAP2Q96SN8 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CDK5RAP2Q96SN8 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CDK5RAP2Q96SN8 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC26.32■■□□□ 1.8
CDK5RAP2Q96SN8 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC26.32■■□□□ 1.8
CDK5RAP2Q96SN8 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CDK5RAP2Q96SN8 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
CDK5RAP2Q96SN8 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
CDK5RAP2Q96SN8 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CDK5RAP2Q96SN8 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CDK5RAP2Q96SN8 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
CDK5RAP2Q96SN8 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CDK5RAP2Q96SN8 AC123595.1-201ENST00000440769 1046 ntBASIC26.31■■□□□ 1.8
CDK5RAP2Q96SN8 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC26.31■■□□□ 1.8
CDK5RAP2Q96SN8 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
CDK5RAP2Q96SN8 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC26.31■■□□□ 1.8
CDK5RAP2Q96SN8 AL353803.4-201ENST00000565882 1934 ntBASIC26.31■■□□□ 1.8
CDK5RAP2Q96SN8 CCDC92B-201ENST00000575506 885 ntBASIC26.3■■□□□ 1.8
CDK5RAP2Q96SN8 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
CDK5RAP2Q96SN8 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
CDK5RAP2Q96SN8 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CDK5RAP2Q96SN8 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CDK5RAP2Q96SN8 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC26.3■■□□□ 1.8
CDK5RAP2Q96SN8 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC26.3■■□□□ 1.8
CDK5RAP2Q96SN8 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC26.29■■□□□ 1.8
CDK5RAP2Q96SN8 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC26.29■■□□□ 1.8
CDK5RAP2Q96SN8 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
CDK5RAP2Q96SN8 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CDK5RAP2Q96SN8 LHPP-203ENST00000392757 840 ntTSL 3 BASIC26.29■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms