Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP1S3Q96PC3 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
AP1S3Q96PC3 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
AP1S3Q96PC3 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
AP1S3Q96PC3 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC16.64■□□□□ 0.26
AP1S3Q96PC3 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.64■□□□□ 0.25
AP1S3Q96PC3 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
AP1S3Q96PC3 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
AP1S3Q96PC3 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC16.64■□□□□ 0.25
AP1S3Q96PC3 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
AP1S3Q96PC3 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC16.64■□□□□ 0.25
AP1S3Q96PC3 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
AP1S3Q96PC3 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC16.64■□□□□ 0.25
AP1S3Q96PC3 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
AP1S3Q96PC3 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
AP1S3Q96PC3 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16.64■□□□□ 0.25
AP1S3Q96PC3 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
AP1S3Q96PC3 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC16.64■□□□□ 0.25
AP1S3Q96PC3 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
AP1S3Q96PC3 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
AP1S3Q96PC3 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
AP1S3Q96PC3 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC16.64■□□□□ 0.25
AP1S3Q96PC3 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
AP1S3Q96PC3 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
AP1S3Q96PC3 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
AP1S3Q96PC3 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP1S3Q96PC3 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP1S3Q96PC3 AL161729.1-201ENST00000604104 1402 ntBASIC16.63■□□□□ 0.25
AP1S3Q96PC3 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC16.63■□□□□ 0.25
AP1S3Q96PC3 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP1S3Q96PC3 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP1S3Q96PC3 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP1S3Q96PC3 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP1S3Q96PC3 MYB-221ENST00000527615 2381 ntTSL 5 BASIC16.63■□□□□ 0.25
AP1S3Q96PC3 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
AP1S3Q96PC3 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
AP1S3Q96PC3 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP1S3Q96PC3 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC16.63■□□□□ 0.25
AP1S3Q96PC3 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP1S3Q96PC3 ANOS2P-203ENST00000472227 1816 ntBASIC16.63■□□□□ 0.25
AP1S3Q96PC3 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP1S3Q96PC3 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
AP1S3Q96PC3 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP1S3Q96PC3 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
AP1S3Q96PC3 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP1S3Q96PC3 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
AP1S3Q96PC3 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
AP1S3Q96PC3 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP1S3Q96PC3 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP1S3Q96PC3 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP1S3Q96PC3 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP1S3Q96PC3 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP1S3Q96PC3 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
AP1S3Q96PC3 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP1S3Q96PC3 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
AP1S3Q96PC3 RAP2CP1-202ENST00000605179 643 ntBASIC16.62■□□□□ 0.25
AP1S3Q96PC3 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP1S3Q96PC3 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP1S3Q96PC3 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
AP1S3Q96PC3 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
AP1S3Q96PC3 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.61■□□□□ 0.25
AP1S3Q96PC3 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
AP1S3Q96PC3 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP1S3Q96PC3 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP1S3Q96PC3 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP1S3Q96PC3 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP1S3Q96PC3 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP1S3Q96PC3 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC16.61■□□□□ 0.25
AP1S3Q96PC3 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.61■□□□□ 0.25
AP1S3Q96PC3 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP1S3Q96PC3 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC16.61■□□□□ 0.25
AP1S3Q96PC3 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC16.61■□□□□ 0.25
AP1S3Q96PC3 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP1S3Q96PC3 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP1S3Q96PC3 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
AP1S3Q96PC3 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
AP1S3Q96PC3 AC233723.2-201ENST00000623798 2106 ntBASIC16.61■□□□□ 0.25
AP1S3Q96PC3 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
AP1S3Q96PC3 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
AP1S3Q96PC3 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP1S3Q96PC3 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
AP1S3Q96PC3 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AP1S3Q96PC3 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP1S3Q96PC3 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC16.6■□□□□ 0.25
AP1S3Q96PC3 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
AP1S3Q96PC3 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP1S3Q96PC3 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP1S3Q96PC3 HES4-204ENST00000484667 667 ntTSL 3 BASIC16.6■□□□□ 0.25
AP1S3Q96PC3 CEP120-209ENST00000515110 606 ntTSL 3 BASIC16.6■□□□□ 0.25
AP1S3Q96PC3 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC16.6■□□□□ 0.25
AP1S3Q96PC3 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC16.6■□□□□ 0.25
AP1S3Q96PC3 AC026202.3-201ENST00000600805 1127 ntBASIC16.6■□□□□ 0.25
AP1S3Q96PC3 BCL2-203ENST00000589955 5011 ntBASIC16.6■□□□□ 0.25
AP1S3Q96PC3 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC16.6■□□□□ 0.25
AP1S3Q96PC3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP1S3Q96PC3 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
AP1S3Q96PC3 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
AP1S3Q96PC3 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP1S3Q96PC3 GALC-202ENST00000393568 2054 ntTSL 2 BASIC16.6■□□□□ 0.25
AP1S3Q96PC3 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms