Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
ZNF48Q96MX3 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ZNF48Q96MX3 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ZNF48Q96MX3 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.99■□□□□ 0.47
ZNF48Q96MX3 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
ZNF48Q96MX3 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ZNF48Q96MX3 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZNF48Q96MX3 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
ZNF48Q96MX3 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
ZNF48Q96MX3 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC17.99■□□□□ 0.47
ZNF48Q96MX3 MIR6084-201ENST00000622012 110 ntBASIC17.99■□□□□ 0.47
ZNF48Q96MX3 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ZNF48Q96MX3 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZNF48Q96MX3 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC17.98■□□□□ 0.47
ZNF48Q96MX3 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF48Q96MX3 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF48Q96MX3 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC17.98■□□□□ 0.47
ZNF48Q96MX3 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF48Q96MX3 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF48Q96MX3 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF48Q96MX3 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF48Q96MX3 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF48Q96MX3 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF48Q96MX3 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF48Q96MX3 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
ZNF48Q96MX3 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
ZNF48Q96MX3 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.97■□□□□ 0.47
ZNF48Q96MX3 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF48Q96MX3 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.97■□□□□ 0.47
ZNF48Q96MX3 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF48Q96MX3 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.97■□□□□ 0.47
ZNF48Q96MX3 MIR572-201ENST00000384983 95 ntBASIC17.97■□□□□ 0.47
ZNF48Q96MX3 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC17.97■□□□□ 0.47
ZNF48Q96MX3 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
ZNF48Q96MX3 KRT18P5-201ENST00000436075 1291 ntBASIC17.97■□□□□ 0.47
ZNF48Q96MX3 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.97■□□□□ 0.47
ZNF48Q96MX3 DUX4L2-201ENST00000561772 1275 ntBASIC17.97■□□□□ 0.47
ZNF48Q96MX3 DUX4L4-201ENST00000566884 1269 ntBASIC17.97■□□□□ 0.47
ZNF48Q96MX3 IKBKGP1-201ENST00000612193 1073 ntBASIC17.97■□□□□ 0.47
ZNF48Q96MX3 RAB43-208ENST00000615093 783 ntTSL 5 BASIC17.97■□□□□ 0.47
ZNF48Q96MX3 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.97■□□□□ 0.47
ZNF48Q96MX3 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF48Q96MX3 AL358852.1-201ENST00000623174 1268 ntBASIC17.97■□□□□ 0.47
ZNF48Q96MX3 DUX4L6-201ENST00000626483 1275 ntBASIC17.97■□□□□ 0.47
ZNF48Q96MX3 DUX4L1-201ENST00000627662 1275 ntBASIC17.97■□□□□ 0.47
ZNF48Q96MX3 DUX4L8-201ENST00000629013 1275 ntBASIC17.97■□□□□ 0.47
ZNF48Q96MX3 DUX4L3-201ENST00000630187 1275 ntBASIC17.97■□□□□ 0.47
ZNF48Q96MX3 DUX4L7-201ENST00000630678 1275 ntBASIC17.97■□□□□ 0.47
ZNF48Q96MX3 DUX4L5-201ENST00000630834 1275 ntBASIC17.97■□□□□ 0.47
ZNF48Q96MX3 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.97■□□□□ 0.47
ZNF48Q96MX3 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF48Q96MX3 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF48Q96MX3 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC17.97■□□□□ 0.47
ZNF48Q96MX3 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF48Q96MX3 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC17.97■□□□□ 0.47
ZNF48Q96MX3 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF48Q96MX3 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF48Q96MX3 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF48Q96MX3 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF48Q96MX3 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
ZNF48Q96MX3 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
ZNF48Q96MX3 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF48Q96MX3 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF48Q96MX3 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF48Q96MX3 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC17.96■□□□□ 0.47
ZNF48Q96MX3 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.96■□□□□ 0.47
ZNF48Q96MX3 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF48Q96MX3 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC17.96■□□□□ 0.47
ZNF48Q96MX3 AC027612.3-201ENST00000413684 1047 ntBASIC17.96■□□□□ 0.47
ZNF48Q96MX3 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
ZNF48Q96MX3 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC17.96■□□□□ 0.47
ZNF48Q96MX3 AC012414.1-201ENST00000556676 535 ntBASIC17.96■□□□□ 0.47
ZNF48Q96MX3 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF48Q96MX3 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF48Q96MX3 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF48Q96MX3 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC17.96■□□□□ 0.46
ZNF48Q96MX3 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
ZNF48Q96MX3 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
ZNF48Q96MX3 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF48Q96MX3 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF48Q96MX3 FP325331.1-202ENST00000623531 1380 ntBASIC17.95■□□□□ 0.46
ZNF48Q96MX3 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF48Q96MX3 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
ZNF48Q96MX3 OR2I1P-207ENST00000453522 948 ntBASIC17.95■□□□□ 0.46
ZNF48Q96MX3 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.95■□□□□ 0.46
ZNF48Q96MX3 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF48Q96MX3 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF48Q96MX3 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF48Q96MX3 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF48Q96MX3 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF48Q96MX3 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF48Q96MX3 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF48Q96MX3 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF48Q96MX3 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.94■□□□□ 0.46
ZNF48Q96MX3 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF48Q96MX3 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.94■□□□□ 0.46
ZNF48Q96MX3 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.94■□□□□ 0.46
ZNF48Q96MX3 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF48Q96MX3 AC022517.1-201ENST00000592429 346 ntBASIC17.94■□□□□ 0.46
ZNF48Q96MX3 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms