Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
CMTM3Q96MX0 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.05■□□□□ 0.64
CMTM3Q96MX0 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CMTM3Q96MX0 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CMTM3Q96MX0 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CMTM3Q96MX0 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CMTM3Q96MX0 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.05■□□□□ 0.64
CMTM3Q96MX0 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CMTM3Q96MX0 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.04■□□□□ 0.64
CMTM3Q96MX0 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CMTM3Q96MX0 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CMTM3Q96MX0 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CMTM3Q96MX0 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.04■□□□□ 0.64
CMTM3Q96MX0 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CMTM3Q96MX0 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CMTM3Q96MX0 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CMTM3Q96MX0 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.04■□□□□ 0.64
CMTM3Q96MX0 AC018755.3-202ENST00000596210 929 ntBASIC19.04■□□□□ 0.64
CMTM3Q96MX0 AC244015.2-201ENST00000616358 1861 ntBASIC19.04■□□□□ 0.64
CMTM3Q96MX0 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CMTM3Q96MX0 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.04■□□□□ 0.64
CMTM3Q96MX0 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CMTM3Q96MX0 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CMTM3Q96MX0 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CMTM3Q96MX0 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.04■□□□□ 0.64
CMTM3Q96MX0 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CMTM3Q96MX0 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CMTM3Q96MX0 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CMTM3Q96MX0 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CMTM3Q96MX0 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CMTM3Q96MX0 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.03■□□□□ 0.64
CMTM3Q96MX0 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CMTM3Q96MX0 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CMTM3Q96MX0 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.03■□□□□ 0.64
CMTM3Q96MX0 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.03■□□□□ 0.64
CMTM3Q96MX0 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CMTM3Q96MX0 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CMTM3Q96MX0 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CMTM3Q96MX0 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CMTM3Q96MX0 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CMTM3Q96MX0 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CMTM3Q96MX0 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.02■□□□□ 0.64
CMTM3Q96MX0 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.02■□□□□ 0.64
CMTM3Q96MX0 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CMTM3Q96MX0 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.02■□□□□ 0.64
CMTM3Q96MX0 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.02■□□□□ 0.64
CMTM3Q96MX0 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CMTM3Q96MX0 AC009831.1-201ENST00000580420 1582 ntBASIC19.02■□□□□ 0.63
CMTM3Q96MX0 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.01■□□□□ 0.63
CMTM3Q96MX0 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CMTM3Q96MX0 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CMTM3Q96MX0 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.01■□□□□ 0.63
CMTM3Q96MX0 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CMTM3Q96MX0 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.01■□□□□ 0.63
CMTM3Q96MX0 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CMTM3Q96MX0 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CMTM3Q96MX0 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CMTM3Q96MX0 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CMTM3Q96MX0 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CMTM3Q96MX0 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CMTM3Q96MX0 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CMTM3Q96MX0 AC133552.2-201ENST00000619106 1032 ntBASIC19.01■□□□□ 0.63
CMTM3Q96MX0 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CMTM3Q96MX0 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CMTM3Q96MX0 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CMTM3Q96MX0 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CMTM3Q96MX0 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CMTM3Q96MX0 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CMTM3Q96MX0 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CMTM3Q96MX0 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19■□□□□ 0.63
CMTM3Q96MX0 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CMTM3Q96MX0 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CMTM3Q96MX0 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19■□□□□ 0.63
CMTM3Q96MX0 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CMTM3Q96MX0 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19■□□□□ 0.63
CMTM3Q96MX0 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
CMTM3Q96MX0 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19■□□□□ 0.63
CMTM3Q96MX0 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CMTM3Q96MX0 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CMTM3Q96MX0 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19■□□□□ 0.63
CMTM3Q96MX0 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19■□□□□ 0.63
CMTM3Q96MX0 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19■□□□□ 0.63
CMTM3Q96MX0 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CMTM3Q96MX0 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
CMTM3Q96MX0 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CMTM3Q96MX0 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CMTM3Q96MX0 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CMTM3Q96MX0 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CMTM3Q96MX0 CEP120-209ENST00000515110 606 ntTSL 3 BASIC18.99■□□□□ 0.63
CMTM3Q96MX0 AL121603.2-201ENST00000557373 2117 ntBASIC18.99■□□□□ 0.63
CMTM3Q96MX0 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CMTM3Q96MX0 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.99■□□□□ 0.63
CMTM3Q96MX0 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CMTM3Q96MX0 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CMTM3Q96MX0 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CMTM3Q96MX0 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CMTM3Q96MX0 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CMTM3Q96MX0 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CMTM3Q96MX0 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.98■□□□□ 0.63
CMTM3Q96MX0 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms