Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 PKD1P6-201ENST00000343738 4769 ntBASIC21.05■□□□□ 0.96
ITCHQ96J02 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ITCHQ96J02 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
ITCHQ96J02 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ITCHQ96J02 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
ITCHQ96J02 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.05■□□□□ 0.96
ITCHQ96J02 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ITCHQ96J02 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ITCHQ96J02 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.05■□□□□ 0.96
ITCHQ96J02 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.05■□□□□ 0.96
ITCHQ96J02 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.05■□□□□ 0.96
ITCHQ96J02 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.05■□□□□ 0.96
ITCHQ96J02 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.05■□□□□ 0.96
ITCHQ96J02 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
ITCHQ96J02 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
ITCHQ96J02 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ITCHQ96J02 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.04■□□□□ 0.96
ITCHQ96J02 AC103724.3-201ENST00000564481 992 ntBASIC21.04■□□□□ 0.96
ITCHQ96J02 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ITCHQ96J02 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ITCHQ96J02 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.04■□□□□ 0.96
ITCHQ96J02 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ITCHQ96J02 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.03■□□□□ 0.96
ITCHQ96J02 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ITCHQ96J02 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
ITCHQ96J02 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ITCHQ96J02 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ITCHQ96J02 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.03■□□□□ 0.96
ITCHQ96J02 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
ITCHQ96J02 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ITCHQ96J02 AC137630.3-201ENST00000607245 391 ntBASIC21.03■□□□□ 0.96
ITCHQ96J02 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ITCHQ96J02 AC092053.2-201ENST00000640557 1818 ntBASIC21.03■□□□□ 0.96
ITCHQ96J02 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.03■□□□□ 0.96
ITCHQ96J02 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ITCHQ96J02 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ITCHQ96J02 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ITCHQ96J02 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ITCHQ96J02 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.02■□□□□ 0.96
ITCHQ96J02 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.02■□□□□ 0.96
ITCHQ96J02 AL033527.3-201ENST00000566366 1196 ntBASIC21.02■□□□□ 0.96
ITCHQ96J02 AC139530.1-201ENST00000575312 1977 ntBASIC21.02■□□□□ 0.96
ITCHQ96J02 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ITCHQ96J02 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ITCHQ96J02 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.02■□□□□ 0.96
ITCHQ96J02 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ITCHQ96J02 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ITCHQ96J02 KRT8P33-201ENST00000508125 1423 ntBASIC21.02■□□□□ 0.96
ITCHQ96J02 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
ITCHQ96J02 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
ITCHQ96J02 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ITCHQ96J02 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ITCHQ96J02 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ITCHQ96J02 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ITCHQ96J02 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.01■□□□□ 0.95
ITCHQ96J02 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.01■□□□□ 0.95
ITCHQ96J02 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ITCHQ96J02 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.01■□□□□ 0.95
ITCHQ96J02 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.01■□□□□ 0.95
ITCHQ96J02 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ITCHQ96J02 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ITCHQ96J02 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
ITCHQ96J02 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ITCHQ96J02 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ITCHQ96J02 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21■□□□□ 0.95
ITCHQ96J02 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
ITCHQ96J02 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ITCHQ96J02 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21■□□□□ 0.95
ITCHQ96J02 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21■□□□□ 0.95
ITCHQ96J02 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21■□□□□ 0.95
ITCHQ96J02 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
ITCHQ96J02 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
ITCHQ96J02 AC005703.6-201ENST00000623265 1329 ntBASIC21■□□□□ 0.95
ITCHQ96J02 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21■□□□□ 0.95
ITCHQ96J02 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21■□□□□ 0.95
ITCHQ96J02 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
ITCHQ96J02 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21■□□□□ 0.95
ITCHQ96J02 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21■□□□□ 0.95
ITCHQ96J02 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ITCHQ96J02 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ITCHQ96J02 AC087742.1-201ENST00000575880 1738 ntBASIC20.99■□□□□ 0.95
ITCHQ96J02 LINC01529-204ENST00000636474 1715 ntBASIC20.99■□□□□ 0.95
ITCHQ96J02 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
ITCHQ96J02 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.99■□□□□ 0.95
ITCHQ96J02 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.99■□□□□ 0.95
ITCHQ96J02 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.99■□□□□ 0.95
ITCHQ96J02 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.99■□□□□ 0.95
ITCHQ96J02 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.99■□□□□ 0.95
ITCHQ96J02 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ITCHQ96J02 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.99■□□□□ 0.95
ITCHQ96J02 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.99■□□□□ 0.95
ITCHQ96J02 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.99■□□□□ 0.95
ITCHQ96J02 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ITCHQ96J02 FP325331.1-202ENST00000623531 1380 ntBASIC20.98■□□□□ 0.95
ITCHQ96J02 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ITCHQ96J02 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.98■□□□□ 0.95
ITCHQ96J02 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ITCHQ96J02 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
ITCHQ96J02 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
ITCHQ96J02 MIR6722-201ENST00000617286 78 ntBASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms