Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 AC066615.1-201ENST00000640911 628 ntBASIC26.33■■□□□ 1.81
CDCA5Q96FF9 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
CDCA5Q96FF9 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
CDCA5Q96FF9 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CDCA5Q96FF9 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC26.33■■□□□ 1.8
CDCA5Q96FF9 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CDCA5Q96FF9 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC26.32■■□□□ 1.8
CDCA5Q96FF9 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CDCA5Q96FF9 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CDCA5Q96FF9 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CDCA5Q96FF9 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CDCA5Q96FF9 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC26.32■■□□□ 1.8
CDCA5Q96FF9 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CDCA5Q96FF9 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CDCA5Q96FF9 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
CDCA5Q96FF9 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CDCA5Q96FF9 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
CDCA5Q96FF9 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
CDCA5Q96FF9 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC26.31■■□□□ 1.8
CDCA5Q96FF9 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC26.31■■□□□ 1.8
CDCA5Q96FF9 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CDCA5Q96FF9 AL121749.1-202ENST00000609313 2153 ntBASIC26.3■■□□□ 1.8
CDCA5Q96FF9 BX005040.4-201ENST00000637145 1518 ntBASIC26.3■■□□□ 1.8
CDCA5Q96FF9 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CDCA5Q96FF9 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
CDCA5Q96FF9 APTR-205ENST00000447009 902 ntTSL 2 BASIC26.3■■□□□ 1.8
CDCA5Q96FF9 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC26.3■■□□□ 1.8
CDCA5Q96FF9 TMEM202-AS1-202ENST00000565181 2325 ntBASIC26.3■■□□□ 1.8
CDCA5Q96FF9 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CDCA5Q96FF9 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CDCA5Q96FF9 LINC01529-204ENST00000636474 1715 ntBASIC26.29■■□□□ 1.8
CDCA5Q96FF9 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CDCA5Q96FF9 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC26.29■■□□□ 1.8
CDCA5Q96FF9 TSPY20P-201ENST00000450910 630 ntBASIC26.29■■□□□ 1.8
CDCA5Q96FF9 SPI1-203ENST00000533030 661 ntTSL 2 BASIC26.29■■□□□ 1.8
CDCA5Q96FF9 GAMT-205ENST00000640762 751 ntTSL 5 BASIC26.29■■□□□ 1.8
CDCA5Q96FF9 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC26.29■■□□□ 1.8
CDCA5Q96FF9 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CDCA5Q96FF9 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CDCA5Q96FF9 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC26.28■■□□□ 1.8
CDCA5Q96FF9 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CDCA5Q96FF9 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CDCA5Q96FF9 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC26.28■■□□□ 1.8
CDCA5Q96FF9 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC26.28■■□□□ 1.8
CDCA5Q96FF9 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CDCA5Q96FF9 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CDCA5Q96FF9 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
CDCA5Q96FF9 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC26.28■■□□□ 1.8
CDCA5Q96FF9 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CDCA5Q96FF9 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC26.28■■□□□ 1.8
CDCA5Q96FF9 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC26.27■■□□□ 1.8
CDCA5Q96FF9 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
CDCA5Q96FF9 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
CDCA5Q96FF9 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC26.27■■□□□ 1.8
CDCA5Q96FF9 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC26.27■■□□□ 1.8
CDCA5Q96FF9 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CDCA5Q96FF9 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
CDCA5Q96FF9 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
CDCA5Q96FF9 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CDCA5Q96FF9 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CDCA5Q96FF9 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CDCA5Q96FF9 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
CDCA5Q96FF9 AC144652.1-201ENST00000609974 1624 ntBASIC26.27■■□□□ 1.8
CDCA5Q96FF9 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CDCA5Q96FF9 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CDCA5Q96FF9 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
CDCA5Q96FF9 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CDCA5Q96FF9 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
CDCA5Q96FF9 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
CDCA5Q96FF9 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CDCA5Q96FF9 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
CDCA5Q96FF9 KRT18P11-201ENST00000435214 1283 ntBASIC26.26■■□□□ 1.79
CDCA5Q96FF9 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC26.26■■□□□ 1.79
CDCA5Q96FF9 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC26.26■■□□□ 1.79
CDCA5Q96FF9 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC26.25■■□□□ 1.79
CDCA5Q96FF9 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CDCA5Q96FF9 TESC-206ENST00000541210 936 ntTSL 3 BASIC26.25■■□□□ 1.79
CDCA5Q96FF9 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC26.25■■□□□ 1.79
CDCA5Q96FF9 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC26.25■■□□□ 1.79
CDCA5Q96FF9 AC142086.2-201ENST00000569753 217 ntBASIC26.25■■□□□ 1.79
CDCA5Q96FF9 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC26.25■■□□□ 1.79
CDCA5Q96FF9 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CDCA5Q96FF9 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC26.24■■□□□ 1.79
CDCA5Q96FF9 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC26.24■■□□□ 1.79
CDCA5Q96FF9 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
CDCA5Q96FF9 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CDCA5Q96FF9 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC26.24■■□□□ 1.79
CDCA5Q96FF9 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CDCA5Q96FF9 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC26.24■■□□□ 1.79
CDCA5Q96FF9 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC26.24■■□□□ 1.79
CDCA5Q96FF9 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC26.24■■□□□ 1.79
CDCA5Q96FF9 MDK-213ENST00000617138 635 ntTSL 2 BASIC26.24■■□□□ 1.79
CDCA5Q96FF9 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC26.24■■□□□ 1.79
CDCA5Q96FF9 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CDCA5Q96FF9 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC26.24■■□□□ 1.79
CDCA5Q96FF9 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
CDCA5Q96FF9 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CDCA5Q96FF9 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CDCA5Q96FF9 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CDCA5Q96FF9 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms