Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
TRIM11Q96F44 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
TRIM11Q96F44 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
TRIM11Q96F44 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.41■■□□□ 1.34
TRIM11Q96F44 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC23.41■■□□□ 1.34
TRIM11Q96F44 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC23.41■■□□□ 1.34
TRIM11Q96F44 LINC00526-201ENST00000581067 1875 ntBASIC23.41■■□□□ 1.34
TRIM11Q96F44 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.41■■□□□ 1.34
TRIM11Q96F44 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRIM11Q96F44 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRIM11Q96F44 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRIM11Q96F44 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
TRIM11Q96F44 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRIM11Q96F44 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRIM11Q96F44 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.4■■□□□ 1.34
TRIM11Q96F44 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.4■■□□□ 1.34
TRIM11Q96F44 TERT-206ENST00000508104 2486 ntTSL 5 BASIC23.4■■□□□ 1.34
TRIM11Q96F44 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
TRIM11Q96F44 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC23.4■■□□□ 1.34
TRIM11Q96F44 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC23.39■■□□□ 1.34
TRIM11Q96F44 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.39■■□□□ 1.34
TRIM11Q96F44 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.39■■□□□ 1.33
TRIM11Q96F44 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
TRIM11Q96F44 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
TRIM11Q96F44 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM11Q96F44 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM11Q96F44 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
TRIM11Q96F44 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM11Q96F44 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM11Q96F44 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.38■■□□□ 1.33
TRIM11Q96F44 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM11Q96F44 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
TRIM11Q96F44 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM11Q96F44 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM11Q96F44 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.38■■□□□ 1.33
TRIM11Q96F44 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
TRIM11Q96F44 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM11Q96F44 AL035685.1-201ENST00000636663 812 ntBASIC23.38■■□□□ 1.33
TRIM11Q96F44 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC23.38■■□□□ 1.33
TRIM11Q96F44 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM11Q96F44 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23.37■■□□□ 1.33
TRIM11Q96F44 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
TRIM11Q96F44 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRIM11Q96F44 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
TRIM11Q96F44 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRIM11Q96F44 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRIM11Q96F44 KRT16P3-201ENST00000439127 1283 ntBASIC23.37■■□□□ 1.33
TRIM11Q96F44 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.37■■□□□ 1.33
TRIM11Q96F44 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.37■■□□□ 1.33
TRIM11Q96F44 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRIM11Q96F44 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
TRIM11Q96F44 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC23.37■■□□□ 1.33
TRIM11Q96F44 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRIM11Q96F44 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.37■■□□□ 1.33
TRIM11Q96F44 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM11Q96F44 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC23.36■■□□□ 1.33
TRIM11Q96F44 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
TRIM11Q96F44 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM11Q96F44 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC23.36■■□□□ 1.33
TRIM11Q96F44 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.36■■□□□ 1.33
TRIM11Q96F44 AL117332.1-201ENST00000622628 974 ntBASIC23.36■■□□□ 1.33
TRIM11Q96F44 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM11Q96F44 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.36■■□□□ 1.33
TRIM11Q96F44 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
TRIM11Q96F44 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM11Q96F44 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM11Q96F44 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM11Q96F44 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
TRIM11Q96F44 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM11Q96F44 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM11Q96F44 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM11Q96F44 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM11Q96F44 LSR-203ENST00000360798 1963 ntTSL 2 BASIC23.35■■□□□ 1.33
TRIM11Q96F44 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM11Q96F44 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.35■■□□□ 1.33
TRIM11Q96F44 AC087742.1-201ENST00000575880 1738 ntBASIC23.35■■□□□ 1.33
TRIM11Q96F44 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM11Q96F44 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM11Q96F44 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM11Q96F44 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.35■■□□□ 1.33
TRIM11Q96F44 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM11Q96F44 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM11Q96F44 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM11Q96F44 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM11Q96F44 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM11Q96F44 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
TRIM11Q96F44 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TRIM11Q96F44 EP400NL-214ENST00000641289 2402 ntBASIC23.34■■□□□ 1.33
TRIM11Q96F44 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TRIM11Q96F44 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.34■■□□□ 1.33
TRIM11Q96F44 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC23.34■■□□□ 1.33
TRIM11Q96F44 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
TRIM11Q96F44 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC23.34■■□□□ 1.33
TRIM11Q96F44 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.34■■□□□ 1.33
TRIM11Q96F44 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC23.34■■□□□ 1.33
TRIM11Q96F44 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TRIM11Q96F44 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TRIM11Q96F44 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
TRIM11Q96F44 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TRIM11Q96F44 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms