Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 LINC01529-204ENST00000636474 1715 ntBASIC25.32■■□□□ 1.64
USP6NLQ92738 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC25.31■■□□□ 1.64
USP6NLQ92738 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
USP6NLQ92738 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
USP6NLQ92738 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC25.31■■□□□ 1.64
USP6NLQ92738 STX7-201ENST00000367937 1090 ntTSL 5 BASIC25.31■■□□□ 1.64
USP6NLQ92738 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
USP6NLQ92738 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
USP6NLQ92738 HSCB-202ENST00000398941 955 ntTSL 2 BASIC25.31■■□□□ 1.64
USP6NLQ92738 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
USP6NLQ92738 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC25.31■■□□□ 1.64
USP6NLQ92738 EMC9-206ENST00000560403 872 ntTSL 2 BASIC25.31■■□□□ 1.64
USP6NLQ92738 GXYLT1P5-201ENST00000614548 1189 ntBASIC25.31■■□□□ 1.64
USP6NLQ92738 AP004607.4-201ENST00000530158 1459 ntBASIC25.31■■□□□ 1.64
USP6NLQ92738 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
USP6NLQ92738 GAS2L1P2-201ENST00000436355 1356 ntBASIC25.31■■□□□ 1.64
USP6NLQ92738 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
USP6NLQ92738 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC25.3■■□□□ 1.64
USP6NLQ92738 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC25.3■■□□□ 1.64
USP6NLQ92738 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC25.3■■□□□ 1.64
USP6NLQ92738 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC25.3■■□□□ 1.64
USP6NLQ92738 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
USP6NLQ92738 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC25.3■■□□□ 1.64
USP6NLQ92738 AC135731.1-201ENST00000569415 2548 ntBASIC25.3■■□□□ 1.64
USP6NLQ92738 SHD-204ENST00000599689 1729 ntTSL 5 BASIC25.29■■□□□ 1.64
USP6NLQ92738 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25.29■■□□□ 1.64
USP6NLQ92738 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
USP6NLQ92738 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC25.29■■□□□ 1.64
USP6NLQ92738 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
USP6NLQ92738 AC137761.2-201ENST00000561729 223 ntBASIC25.29■■□□□ 1.64
USP6NLQ92738 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC25.29■■□□□ 1.64
USP6NLQ92738 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC25.29■■□□□ 1.64
USP6NLQ92738 AC145350.3-201ENST00000569033 163 ntBASIC25.29■■□□□ 1.64
USP6NLQ92738 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
USP6NLQ92738 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC25.29■■□□□ 1.64
USP6NLQ92738 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC25.29■■□□□ 1.64
USP6NLQ92738 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
USP6NLQ92738 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
USP6NLQ92738 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
USP6NLQ92738 RARA-203ENST00000394086 2008 ntTSL 2 BASIC25.28■■□□□ 1.64
USP6NLQ92738 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.28■■□□□ 1.64
USP6NLQ92738 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
USP6NLQ92738 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC25.28■■□□□ 1.64
USP6NLQ92738 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC25.28■■□□□ 1.64
USP6NLQ92738 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
USP6NLQ92738 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
USP6NLQ92738 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
USP6NLQ92738 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
USP6NLQ92738 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
USP6NLQ92738 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC25.27■■□□□ 1.64
USP6NLQ92738 DBI-210ENST00000542275 757 ntTSL 5 BASIC25.27■■□□□ 1.64
USP6NLQ92738 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
USP6NLQ92738 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
USP6NLQ92738 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
USP6NLQ92738 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
USP6NLQ92738 AP003733.4-201ENST00000623785 1697 ntBASIC25.26■■□□□ 1.63
USP6NLQ92738 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
USP6NLQ92738 AC016769.1-201ENST00000409132 1010 ntBASIC25.26■■□□□ 1.63
USP6NLQ92738 MAP2K4P1-201ENST00000438453 1195 ntBASIC25.26■■□□□ 1.63
USP6NLQ92738 AC004854.2-201ENST00000608450 1441 ntBASIC25.26■■□□□ 1.63
USP6NLQ92738 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
USP6NLQ92738 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC25.25■■□□□ 1.63
USP6NLQ92738 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
USP6NLQ92738 AC026185.1-201ENST00000445748 174 ntBASIC25.25■■□□□ 1.63
USP6NLQ92738 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
USP6NLQ92738 PPP1R14BP3-201ENST00000509033 445 ntBASIC25.25■■□□□ 1.63
USP6NLQ92738 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC25.25■■□□□ 1.63
USP6NLQ92738 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC25.25■■□□□ 1.63
USP6NLQ92738 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
USP6NLQ92738 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
USP6NLQ92738 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
USP6NLQ92738 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
USP6NLQ92738 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
USP6NLQ92738 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
USP6NLQ92738 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
USP6NLQ92738 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
USP6NLQ92738 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC25.24■■□□□ 1.63
USP6NLQ92738 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
USP6NLQ92738 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
USP6NLQ92738 COX20-201ENST00000366528 568 ntTSL 2 BASIC25.24■■□□□ 1.63
USP6NLQ92738 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
USP6NLQ92738 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
USP6NLQ92738 AC104771.1-201ENST00000603335 964 ntBASIC25.24■■□□□ 1.63
USP6NLQ92738 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
USP6NLQ92738 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
USP6NLQ92738 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
USP6NLQ92738 AC022211.4-201ENST00000625094 2161 ntBASIC25.23■■□□□ 1.63
USP6NLQ92738 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
USP6NLQ92738 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
USP6NLQ92738 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
USP6NLQ92738 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
USP6NLQ92738 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
USP6NLQ92738 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
USP6NLQ92738 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
USP6NLQ92738 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
USP6NLQ92738 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
USP6NLQ92738 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
USP6NLQ92738 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC25.22■■□□□ 1.63
USP6NLQ92738 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC25.22■■□□□ 1.63
USP6NLQ92738 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms