Protein–RNA interactions for Protein: Q92729

PTPRU, Receptor-type tyrosine-protein phosphatase U, humanhuman

Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRUQ92729 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
PTPRUQ92729 RARA-203ENST00000394086 2008 ntTSL 2 BASIC31.42■■■□□ 2.62
PTPRUQ92729 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC31.42■■■□□ 2.62
PTPRUQ92729 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC31.42■■■□□ 2.62
PTPRUQ92729 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC31.42■■■□□ 2.62
PTPRUQ92729 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
PTPRUQ92729 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
PTPRUQ92729 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
PTPRUQ92729 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
PTPRUQ92729 TMEM202-AS1-202ENST00000565181 2325 ntBASIC31.41■■■□□ 2.62
PTPRUQ92729 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC31.41■■■□□ 2.62
PTPRUQ92729 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
PTPRUQ92729 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC31.4■■■□□ 2.62
PTPRUQ92729 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC31.4■■■□□ 2.62
PTPRUQ92729 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
PTPRUQ92729 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC31.4■■■□□ 2.62
PTPRUQ92729 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC31.4■■■□□ 2.62
PTPRUQ92729 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC31.4■■■□□ 2.62
PTPRUQ92729 MIR663A-201ENST00000385250 93 ntBASIC31.4■■■□□ 2.62
PTPRUQ92729 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
PTPRUQ92729 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC31.4■■■□□ 2.62
PTPRUQ92729 AC006970.2-201ENST00000450065 779 ntBASIC31.4■■■□□ 2.62
PTPRUQ92729 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
PTPRUQ92729 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
PTPRUQ92729 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
PTPRUQ92729 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC31.39■■■□□ 2.62
PTPRUQ92729 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
PTPRUQ92729 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC31.39■■■□□ 2.61
PTPRUQ92729 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC31.39■■■□□ 2.61
PTPRUQ92729 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
PTPRUQ92729 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC31.38■■■□□ 2.61
PTPRUQ92729 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
PTPRUQ92729 AC144652.1-201ENST00000609974 1624 ntBASIC31.38■■■□□ 2.61
PTPRUQ92729 EI24-213ENST00000618552 1747 ntTSL 5 BASIC31.38■■■□□ 2.61
PTPRUQ92729 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC31.38■■■□□ 2.61
PTPRUQ92729 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
PTPRUQ92729 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC31.38■■■□□ 2.61
PTPRUQ92729 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC31.38■■■□□ 2.61
PTPRUQ92729 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC31.38■■■□□ 2.61
PTPRUQ92729 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC31.37■■■□□ 2.61
PTPRUQ92729 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC31.37■■■□□ 2.61
PTPRUQ92729 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
PTPRUQ92729 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
PTPRUQ92729 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC31.37■■■□□ 2.61
PTPRUQ92729 GAMT-205ENST00000640762 751 ntTSL 5 BASIC31.37■■■□□ 2.61
PTPRUQ92729 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC31.36■■■□□ 2.61
PTPRUQ92729 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
PTPRUQ92729 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
PTPRUQ92729 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
PTPRUQ92729 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
PTPRUQ92729 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
PTPRUQ92729 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
PTPRUQ92729 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
PTPRUQ92729 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
PTPRUQ92729 AC135731.1-201ENST00000569415 2548 ntBASIC31.35■■■□□ 2.61
PTPRUQ92729 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
PTPRUQ92729 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC31.35■■■□□ 2.61
PTPRUQ92729 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC31.34■■■□□ 2.61
PTPRUQ92729 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC31.34■■■□□ 2.61
PTPRUQ92729 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC31.34■■■□□ 2.61
PTPRUQ92729 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC31.34■■■□□ 2.61
PTPRUQ92729 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC31.34■■■□□ 2.61
PTPRUQ92729 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC31.34■■■□□ 2.61
PTPRUQ92729 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
PTPRUQ92729 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC31.34■■■□□ 2.61
PTPRUQ92729 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
PTPRUQ92729 WT1-AS_3.1-201ENST00000613262 234 ntBASIC31.33■■■□□ 2.61
PTPRUQ92729 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
PTPRUQ92729 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.61
PTPRUQ92729 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC31.32■■■□□ 2.61
PTPRUQ92729 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
PTPRUQ92729 AL050303.2-201ENST00000619798 666 ntBASIC31.32■■■□□ 2.6
PTPRUQ92729 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
PTPRUQ92729 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
PTPRUQ92729 LINC01529-204ENST00000636474 1715 ntBASIC31.31■■■□□ 2.6
PTPRUQ92729 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
PTPRUQ92729 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
PTPRUQ92729 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC31.31■■■□□ 2.6
PTPRUQ92729 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC31.31■■■□□ 2.6
PTPRUQ92729 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC31.31■■■□□ 2.6
PTPRUQ92729 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC31.31■■■□□ 2.6
PTPRUQ92729 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
PTPRUQ92729 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC31.31■■■□□ 2.6
PTPRUQ92729 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC31.31■■■□□ 2.6
PTPRUQ92729 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
PTPRUQ92729 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
PTPRUQ92729 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
PTPRUQ92729 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
PTPRUQ92729 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC31.3■■■□□ 2.6
PTPRUQ92729 BX005040.4-201ENST00000637145 1518 ntBASIC31.3■■■□□ 2.6
PTPRUQ92729 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
PTPRUQ92729 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC31.3■■■□□ 2.6
PTPRUQ92729 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
PTPRUQ92729 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
PTPRUQ92729 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC31.29■■■□□ 2.6
PTPRUQ92729 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
PTPRUQ92729 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC31.29■■■□□ 2.6
PTPRUQ92729 AC011767.1-201ENST00000617410 1153 ntBASIC31.29■■■□□ 2.6
PTPRUQ92729 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
PTPRUQ92729 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms