Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB40AQ8WXH6 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.4■□□□□ 0.7
RAB40AQ8WXH6 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB40AQ8WXH6 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
RAB40AQ8WXH6 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB40AQ8WXH6 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RAB40AQ8WXH6 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB40AQ8WXH6 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB40AQ8WXH6 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB40AQ8WXH6 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.39■□□□□ 0.7
RAB40AQ8WXH6 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RAB40AQ8WXH6 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.39■□□□□ 0.7
RAB40AQ8WXH6 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB40AQ8WXH6 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
RAB40AQ8WXH6 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RAB40AQ8WXH6 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.39■□□□□ 0.69
RAB40AQ8WXH6 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.39■□□□□ 0.69
RAB40AQ8WXH6 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.39■□□□□ 0.69
RAB40AQ8WXH6 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RAB40AQ8WXH6 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB40AQ8WXH6 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
RAB40AQ8WXH6 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB40AQ8WXH6 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
RAB40AQ8WXH6 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
RAB40AQ8WXH6 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB40AQ8WXH6 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB40AQ8WXH6 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.38■□□□□ 0.69
RAB40AQ8WXH6 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB40AQ8WXH6 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB40AQ8WXH6 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.38■□□□□ 0.69
RAB40AQ8WXH6 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.38■□□□□ 0.69
RAB40AQ8WXH6 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
RAB40AQ8WXH6 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.38■□□□□ 0.69
RAB40AQ8WXH6 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.38■□□□□ 0.69
RAB40AQ8WXH6 AC092053.2-201ENST00000640557 1818 ntBASIC19.38■□□□□ 0.69
RAB40AQ8WXH6 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB40AQ8WXH6 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.37■□□□□ 0.69
RAB40AQ8WXH6 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB40AQ8WXH6 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RAB40AQ8WXH6 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB40AQ8WXH6 AC021242.3-201ENST00000607598 1377 ntBASIC19.37■□□□□ 0.69
RAB40AQ8WXH6 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB40AQ8WXH6 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
RAB40AQ8WXH6 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.37■□□□□ 0.69
RAB40AQ8WXH6 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
RAB40AQ8WXH6 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB40AQ8WXH6 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RAB40AQ8WXH6 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
RAB40AQ8WXH6 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RAB40AQ8WXH6 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.37■□□□□ 0.69
RAB40AQ8WXH6 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB40AQ8WXH6 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB40AQ8WXH6 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB40AQ8WXH6 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB40AQ8WXH6 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.36■□□□□ 0.69
RAB40AQ8WXH6 C11orf96-202ENST00000528572 1834 ntBASIC19.36■□□□□ 0.69
RAB40AQ8WXH6 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RAB40AQ8WXH6 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
RAB40AQ8WXH6 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.36■□□□□ 0.69
RAB40AQ8WXH6 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB40AQ8WXH6 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB40AQ8WXH6 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.35■□□□□ 0.69
RAB40AQ8WXH6 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.35■□□□□ 0.69
RAB40AQ8WXH6 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RAB40AQ8WXH6 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.35■□□□□ 0.69
RAB40AQ8WXH6 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB40AQ8WXH6 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RAB40AQ8WXH6 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.35■□□□□ 0.69
RAB40AQ8WXH6 ALDH1A3-203ENST00000557963 1670 ntBASIC19.35■□□□□ 0.69
RAB40AQ8WXH6 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
RAB40AQ8WXH6 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.35■□□□□ 0.69
RAB40AQ8WXH6 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB40AQ8WXH6 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB40AQ8WXH6 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.35■□□□□ 0.69
RAB40AQ8WXH6 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
RAB40AQ8WXH6 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
RAB40AQ8WXH6 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB40AQ8WXH6 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB40AQ8WXH6 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.34■□□□□ 0.69
RAB40AQ8WXH6 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
RAB40AQ8WXH6 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RAB40AQ8WXH6 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB40AQ8WXH6 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.34■□□□□ 0.69
RAB40AQ8WXH6 AL356441.2-201ENST00000443009 864 ntBASIC19.34■□□□□ 0.69
RAB40AQ8WXH6 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.34■□□□□ 0.69
RAB40AQ8WXH6 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB40AQ8WXH6 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.34■□□□□ 0.69
RAB40AQ8WXH6 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB40AQ8WXH6 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB40AQ8WXH6 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB40AQ8WXH6 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RAB40AQ8WXH6 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.33■□□□□ 0.69
RAB40AQ8WXH6 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RAB40AQ8WXH6 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
RAB40AQ8WXH6 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
RAB40AQ8WXH6 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
RAB40AQ8WXH6 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RAB40AQ8WXH6 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAB40AQ8WXH6 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.33■□□□□ 0.68
RAB40AQ8WXH6 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms