Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
ATL1Q8WXF7 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ATL1Q8WXF7 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
ATL1Q8WXF7 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ATL1Q8WXF7 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ATL1Q8WXF7 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ATL1Q8WXF7 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ATL1Q8WXF7 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.56■■□□□ 1.04
ATL1Q8WXF7 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ATL1Q8WXF7 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATL1Q8WXF7 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
ATL1Q8WXF7 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATL1Q8WXF7 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.55■■□□□ 1.04
ATL1Q8WXF7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.55■■□□□ 1.04
ATL1Q8WXF7 AC092171.4-201ENST00000609130 632 ntBASIC21.55■■□□□ 1.04
ATL1Q8WXF7 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.55■■□□□ 1.04
ATL1Q8WXF7 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATL1Q8WXF7 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATL1Q8WXF7 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATL1Q8WXF7 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.54■■□□□ 1.04
ATL1Q8WXF7 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATL1Q8WXF7 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.54■■□□□ 1.04
ATL1Q8WXF7 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ATL1Q8WXF7 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ATL1Q8WXF7 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.54■■□□□ 1.04
ATL1Q8WXF7 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
ATL1Q8WXF7 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
ATL1Q8WXF7 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATL1Q8WXF7 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.54■■□□□ 1.04
ATL1Q8WXF7 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATL1Q8WXF7 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.54■■□□□ 1.04
ATL1Q8WXF7 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.54■■□□□ 1.04
ATL1Q8WXF7 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.53■■□□□ 1.04
ATL1Q8WXF7 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.53■■□□□ 1.04
ATL1Q8WXF7 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.53■■□□□ 1.04
ATL1Q8WXF7 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.53■■□□□ 1.04
ATL1Q8WXF7 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.53■■□□□ 1.04
ATL1Q8WXF7 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.53■■□□□ 1.04
ATL1Q8WXF7 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATL1Q8WXF7 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATL1Q8WXF7 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
ATL1Q8WXF7 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ATL1Q8WXF7 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATL1Q8WXF7 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATL1Q8WXF7 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
ATL1Q8WXF7 ESRRAP2-201ENST00000418437 1549 ntBASIC21.52■■□□□ 1.04
ATL1Q8WXF7 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATL1Q8WXF7 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.52■■□□□ 1.04
ATL1Q8WXF7 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.52■■□□□ 1.04
ATL1Q8WXF7 AL512631.2-201ENST00000604634 923 ntBASIC21.52■■□□□ 1.04
ATL1Q8WXF7 AL499627.2-201ENST00000606283 725 ntBASIC21.52■■□□□ 1.04
ATL1Q8WXF7 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.52■■□□□ 1.04
ATL1Q8WXF7 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATL1Q8WXF7 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATL1Q8WXF7 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
ATL1Q8WXF7 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
ATL1Q8WXF7 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
ATL1Q8WXF7 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.51■■□□□ 1.03
ATL1Q8WXF7 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ATL1Q8WXF7 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ATL1Q8WXF7 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ATL1Q8WXF7 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
ATL1Q8WXF7 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.51■■□□□ 1.03
ATL1Q8WXF7 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.51■■□□□ 1.03
ATL1Q8WXF7 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATL1Q8WXF7 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ATL1Q8WXF7 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.51■■□□□ 1.03
ATL1Q8WXF7 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.51■■□□□ 1.03
ATL1Q8WXF7 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.51■■□□□ 1.03
ATL1Q8WXF7 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATL1Q8WXF7 C1orf229-201ENST00000623686 2258 ntBASIC21.51■■□□□ 1.03
ATL1Q8WXF7 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATL1Q8WXF7 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATL1Q8WXF7 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ATL1Q8WXF7 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
ATL1Q8WXF7 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATL1Q8WXF7 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATL1Q8WXF7 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATL1Q8WXF7 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.5■■□□□ 1.03
ATL1Q8WXF7 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATL1Q8WXF7 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ATL1Q8WXF7 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATL1Q8WXF7 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ATL1Q8WXF7 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATL1Q8WXF7 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.5■■□□□ 1.03
ATL1Q8WXF7 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
ATL1Q8WXF7 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.5■■□□□ 1.03
ATL1Q8WXF7 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.5■■□□□ 1.03
ATL1Q8WXF7 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATL1Q8WXF7 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
ATL1Q8WXF7 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
ATL1Q8WXF7 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.5■■□□□ 1.03
ATL1Q8WXF7 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
ATL1Q8WXF7 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATL1Q8WXF7 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATL1Q8WXF7 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATL1Q8WXF7 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATL1Q8WXF7 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATL1Q8WXF7 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.49■■□□□ 1.03
ATL1Q8WXF7 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms