Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
TMEM40Q8WWA1 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TMEM40Q8WWA1 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
TMEM40Q8WWA1 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
TMEM40Q8WWA1 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC24.29■■□□□ 1.48
TMEM40Q8WWA1 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
TMEM40Q8WWA1 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
TMEM40Q8WWA1 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
TMEM40Q8WWA1 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC24.29■■□□□ 1.48
TMEM40Q8WWA1 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
TMEM40Q8WWA1 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC24.29■■□□□ 1.48
TMEM40Q8WWA1 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
TMEM40Q8WWA1 AL353803.4-201ENST00000565882 1934 ntBASIC24.29■■□□□ 1.48
TMEM40Q8WWA1 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC24.29■■□□□ 1.48
TMEM40Q8WWA1 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
TMEM40Q8WWA1 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TMEM40Q8WWA1 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC24.28■■□□□ 1.48
TMEM40Q8WWA1 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
TMEM40Q8WWA1 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
TMEM40Q8WWA1 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC24.28■■□□□ 1.48
TMEM40Q8WWA1 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC24.28■■□□□ 1.48
TMEM40Q8WWA1 IKBKGP1-201ENST00000612193 1073 ntBASIC24.28■■□□□ 1.48
TMEM40Q8WWA1 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC24.28■■□□□ 1.48
TMEM40Q8WWA1 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TMEM40Q8WWA1 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
TMEM40Q8WWA1 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
TMEM40Q8WWA1 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TMEM40Q8WWA1 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC24.28■■□□□ 1.48
TMEM40Q8WWA1 AC004687.1-201ENST00000579003 1625 ntBASIC24.28■■□□□ 1.48
TMEM40Q8WWA1 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TMEM40Q8WWA1 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TMEM40Q8WWA1 LHPP-203ENST00000392757 840 ntTSL 3 BASIC24.27■■□□□ 1.48
TMEM40Q8WWA1 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC24.27■■□□□ 1.48
TMEM40Q8WWA1 CCDC92B-201ENST00000575506 885 ntBASIC24.27■■□□□ 1.48
TMEM40Q8WWA1 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TMEM40Q8WWA1 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TMEM40Q8WWA1 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
TMEM40Q8WWA1 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TMEM40Q8WWA1 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
TMEM40Q8WWA1 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
TMEM40Q8WWA1 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TMEM40Q8WWA1 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TMEM40Q8WWA1 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TMEM40Q8WWA1 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TMEM40Q8WWA1 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC24.26■■□□□ 1.47
TMEM40Q8WWA1 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC24.26■■□□□ 1.47
TMEM40Q8WWA1 AC022517.1-201ENST00000592429 346 ntBASIC24.26■■□□□ 1.47
TMEM40Q8WWA1 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TMEM40Q8WWA1 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
TMEM40Q8WWA1 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
TMEM40Q8WWA1 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TMEM40Q8WWA1 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
TMEM40Q8WWA1 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
TMEM40Q8WWA1 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
TMEM40Q8WWA1 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
TMEM40Q8WWA1 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
TMEM40Q8WWA1 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TMEM40Q8WWA1 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC24.25■■□□□ 1.47
TMEM40Q8WWA1 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC24.25■■□□□ 1.47
TMEM40Q8WWA1 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
TMEM40Q8WWA1 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
TMEM40Q8WWA1 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC24.24■■□□□ 1.47
TMEM40Q8WWA1 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
TMEM40Q8WWA1 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC24.24■■□□□ 1.47
TMEM40Q8WWA1 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC24.24■■□□□ 1.47
TMEM40Q8WWA1 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
TMEM40Q8WWA1 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
TMEM40Q8WWA1 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC24.23■■□□□ 1.47
TMEM40Q8WWA1 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
TMEM40Q8WWA1 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
TMEM40Q8WWA1 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC24.23■■□□□ 1.47
TMEM40Q8WWA1 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
TMEM40Q8WWA1 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
TMEM40Q8WWA1 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
TMEM40Q8WWA1 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
TMEM40Q8WWA1 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC24.22■■□□□ 1.47
TMEM40Q8WWA1 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
TMEM40Q8WWA1 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC24.22■■□□□ 1.47
TMEM40Q8WWA1 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC24.22■■□□□ 1.47
TMEM40Q8WWA1 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC24.22■■□□□ 1.47
TMEM40Q8WWA1 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
TMEM40Q8WWA1 TERF1P2-201ENST00000583350 1212 ntBASIC24.22■■□□□ 1.47
TMEM40Q8WWA1 AC092437.1-201ENST00000624794 1048 ntBASIC24.22■■□□□ 1.47
TMEM40Q8WWA1 AC105233.4-201ENST00000642045 216 ntBASIC24.22■■□□□ 1.47
TMEM40Q8WWA1 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
TMEM40Q8WWA1 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC24.21■■□□□ 1.47
TMEM40Q8WWA1 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
TMEM40Q8WWA1 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
TMEM40Q8WWA1 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
TMEM40Q8WWA1 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC24.21■■□□□ 1.47
TMEM40Q8WWA1 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
TMEM40Q8WWA1 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC24.21■■□□□ 1.47
TMEM40Q8WWA1 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC24.21■■□□□ 1.47
TMEM40Q8WWA1 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
TMEM40Q8WWA1 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC24.21■■□□□ 1.47
TMEM40Q8WWA1 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
TMEM40Q8WWA1 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
TMEM40Q8WWA1 RARA-203ENST00000394086 2008 ntTSL 2 BASIC24.2■■□□□ 1.47
TMEM40Q8WWA1 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
TMEM40Q8WWA1 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms