Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC22.39■■□□□ 1.17
PTCD2Q8WV60 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PTCD2Q8WV60 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PTCD2Q8WV60 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC22.39■■□□□ 1.17
PTCD2Q8WV60 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
PTCD2Q8WV60 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
PTCD2Q8WV60 AC079834.2-201ENST00000609776 1949 ntBASIC22.38■■□□□ 1.17
PTCD2Q8WV60 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC22.38■■□□□ 1.17
PTCD2Q8WV60 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
PTCD2Q8WV60 SRD5A1P1-201ENST00000442297 786 ntBASIC22.38■■□□□ 1.17
PTCD2Q8WV60 DUX4L4-201ENST00000566884 1269 ntBASIC22.38■■□□□ 1.17
PTCD2Q8WV60 RALB-208ENST00000631312 311 ntTSL 5 BASIC22.38■■□□□ 1.17
PTCD2Q8WV60 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PTCD2Q8WV60 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
PTCD2Q8WV60 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC22.38■■□□□ 1.17
PTCD2Q8WV60 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PTCD2Q8WV60 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PTCD2Q8WV60 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PTCD2Q8WV60 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PTCD2Q8WV60 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC22.38■■□□□ 1.17
PTCD2Q8WV60 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
PTCD2Q8WV60 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PTCD2Q8WV60 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PTCD2Q8WV60 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
PTCD2Q8WV60 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PTCD2Q8WV60 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PTCD2Q8WV60 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PTCD2Q8WV60 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC22.37■■□□□ 1.17
PTCD2Q8WV60 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.37■■□□□ 1.17
PTCD2Q8WV60 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
PTCD2Q8WV60 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
PTCD2Q8WV60 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
PTCD2Q8WV60 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PTCD2Q8WV60 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PTCD2Q8WV60 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PTCD2Q8WV60 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PTCD2Q8WV60 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PTCD2Q8WV60 ASB1-202ENST00000409297 878 ntTSL 5 BASIC22.36■■□□□ 1.17
PTCD2Q8WV60 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC22.36■■□□□ 1.17
PTCD2Q8WV60 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
PTCD2Q8WV60 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PTCD2Q8WV60 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC22.36■■□□□ 1.17
PTCD2Q8WV60 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
PTCD2Q8WV60 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PTCD2Q8WV60 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PTCD2Q8WV60 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
PTCD2Q8WV60 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PTCD2Q8WV60 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
PTCD2Q8WV60 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PTCD2Q8WV60 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PTCD2Q8WV60 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC22.35■■□□□ 1.17
PTCD2Q8WV60 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
PTCD2Q8WV60 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.35■■□□□ 1.17
PTCD2Q8WV60 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
PTCD2Q8WV60 UNC93B3-201ENST00000308076 687 ntBASIC22.35■■□□□ 1.17
PTCD2Q8WV60 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PTCD2Q8WV60 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PTCD2Q8WV60 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PTCD2Q8WV60 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
PTCD2Q8WV60 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PTCD2Q8WV60 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PTCD2Q8WV60 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
PTCD2Q8WV60 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PTCD2Q8WV60 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC22.35■■□□□ 1.17
PTCD2Q8WV60 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PTCD2Q8WV60 AC019069.1-201ENST00000610008 1333 ntBASIC22.34■■□□□ 1.17
PTCD2Q8WV60 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PTCD2Q8WV60 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.34■■□□□ 1.17
PTCD2Q8WV60 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
PTCD2Q8WV60 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PTCD2Q8WV60 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PTCD2Q8WV60 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PTCD2Q8WV60 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PTCD2Q8WV60 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC22.34■■□□□ 1.17
PTCD2Q8WV60 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC22.34■■□□□ 1.17
PTCD2Q8WV60 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC22.34■■□□□ 1.17
PTCD2Q8WV60 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
PTCD2Q8WV60 C17orf82-201ENST00000623772 1530 ntBASIC22.33■■□□□ 1.17
PTCD2Q8WV60 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
PTCD2Q8WV60 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PTCD2Q8WV60 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC22.33■■□□□ 1.17
PTCD2Q8WV60 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC22.33■■□□□ 1.17
PTCD2Q8WV60 AC009086.3-201ENST00000623486 1008 ntBASIC22.33■■□□□ 1.17
PTCD2Q8WV60 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
PTCD2Q8WV60 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.16
PTCD2Q8WV60 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
PTCD2Q8WV60 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PTCD2Q8WV60 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PTCD2Q8WV60 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
PTCD2Q8WV60 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PTCD2Q8WV60 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
PTCD2Q8WV60 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PTCD2Q8WV60 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PTCD2Q8WV60 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
PTCD2Q8WV60 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PTCD2Q8WV60 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PTCD2Q8WV60 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PTCD2Q8WV60 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PTCD2Q8WV60 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PTCD2Q8WV60 AC127496.7-201ENST00000625110 1798 ntBASIC22.31■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms