Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
SNED1Q8TER0 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
SNED1Q8TER0 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
SNED1Q8TER0 PPP1R14BP3-201ENST00000509033 445 ntBASIC27.34■■□□□ 1.97
SNED1Q8TER0 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC27.34■■□□□ 1.97
SNED1Q8TER0 AC137761.2-201ENST00000561729 223 ntBASIC27.34■■□□□ 1.97
SNED1Q8TER0 AC145350.3-201ENST00000569033 163 ntBASIC27.34■■□□□ 1.97
SNED1Q8TER0 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC27.34■■□□□ 1.97
SNED1Q8TER0 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
SNED1Q8TER0 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
SNED1Q8TER0 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
SNED1Q8TER0 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
SNED1Q8TER0 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC27.33■■□□□ 1.97
SNED1Q8TER0 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
SNED1Q8TER0 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC27.33■■□□□ 1.97
SNED1Q8TER0 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
SNED1Q8TER0 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
SNED1Q8TER0 SHD-204ENST00000599689 1729 ntTSL 5 BASIC27.33■■□□□ 1.96
SNED1Q8TER0 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC27.33■■□□□ 1.96
SNED1Q8TER0 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC27.32■■□□□ 1.96
SNED1Q8TER0 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC27.32■■□□□ 1.96
SNED1Q8TER0 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SNED1Q8TER0 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC27.32■■□□□ 1.96
SNED1Q8TER0 AC026185.1-201ENST00000445748 174 ntBASIC27.32■■□□□ 1.96
SNED1Q8TER0 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC27.32■■□□□ 1.96
SNED1Q8TER0 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC27.32■■□□□ 1.96
SNED1Q8TER0 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC27.32■■□□□ 1.96
SNED1Q8TER0 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SNED1Q8TER0 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SNED1Q8TER0 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SNED1Q8TER0 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC27.31■■□□□ 1.96
SNED1Q8TER0 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
SNED1Q8TER0 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SNED1Q8TER0 EI24-213ENST00000618552 1747 ntTSL 5 BASIC27.31■■□□□ 1.96
SNED1Q8TER0 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SNED1Q8TER0 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
SNED1Q8TER0 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SNED1Q8TER0 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
SNED1Q8TER0 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
SNED1Q8TER0 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
SNED1Q8TER0 AC144652.1-201ENST00000609974 1624 ntBASIC27.3■■□□□ 1.96
SNED1Q8TER0 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SNED1Q8TER0 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
SNED1Q8TER0 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC27.3■■□□□ 1.96
SNED1Q8TER0 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
SNED1Q8TER0 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SNED1Q8TER0 AC016769.1-201ENST00000409132 1010 ntBASIC27.29■■□□□ 1.96
SNED1Q8TER0 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
SNED1Q8TER0 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC27.29■■□□□ 1.96
SNED1Q8TER0 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC27.29■■□□□ 1.96
SNED1Q8TER0 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
SNED1Q8TER0 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SNED1Q8TER0 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SNED1Q8TER0 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
SNED1Q8TER0 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC27.28■■□□□ 1.96
SNED1Q8TER0 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SNED1Q8TER0 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
SNED1Q8TER0 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
SNED1Q8TER0 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SNED1Q8TER0 TMEM202-AS1-202ENST00000565181 2325 ntBASIC27.27■■□□□ 1.96
SNED1Q8TER0 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SNED1Q8TER0 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
SNED1Q8TER0 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
SNED1Q8TER0 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC27.26■■□□□ 1.95
SNED1Q8TER0 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC27.26■■□□□ 1.95
SNED1Q8TER0 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
SNED1Q8TER0 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC27.26■■□□□ 1.95
SNED1Q8TER0 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
SNED1Q8TER0 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC27.26■■□□□ 1.95
SNED1Q8TER0 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC27.26■■□□□ 1.95
SNED1Q8TER0 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC27.26■■□□□ 1.95
SNED1Q8TER0 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
SNED1Q8TER0 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC27.25■■□□□ 1.95
SNED1Q8TER0 BID-214ENST00000617586 542 ntTSL 5 BASIC27.25■■□□□ 1.95
SNED1Q8TER0 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
SNED1Q8TER0 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC27.25■■□□□ 1.95
SNED1Q8TER0 RARA-203ENST00000394086 2008 ntTSL 2 BASIC27.25■■□□□ 1.95
SNED1Q8TER0 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
SNED1Q8TER0 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
SNED1Q8TER0 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
SNED1Q8TER0 COX20-201ENST00000366528 568 ntTSL 2 BASIC27.24■■□□□ 1.95
SNED1Q8TER0 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
SNED1Q8TER0 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
SNED1Q8TER0 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC27.24■■□□□ 1.95
SNED1Q8TER0 NCF1B-203ENST00000435988 1254 ntBASIC27.24■■□□□ 1.95
SNED1Q8TER0 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC27.24■■□□□ 1.95
SNED1Q8TER0 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC27.24■■□□□ 1.95
SNED1Q8TER0 AC022211.4-201ENST00000625094 2161 ntBASIC27.24■■□□□ 1.95
SNED1Q8TER0 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC27.24■■□□□ 1.95
SNED1Q8TER0 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC27.24■■□□□ 1.95
SNED1Q8TER0 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
SNED1Q8TER0 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
SNED1Q8TER0 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC27.24■■□□□ 1.95
SNED1Q8TER0 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SNED1Q8TER0 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SNED1Q8TER0 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SNED1Q8TER0 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC27.23■■□□□ 1.95
SNED1Q8TER0 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
SNED1Q8TER0 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SNED1Q8TER0 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms