Protein–RNA interactions for Protein: Q8TC41

RNF217, Probable E3 ubiquitin-protein ligase RNF217, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF217Q8TC41 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNF217Q8TC41 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.08■□□□□ 0.97
RNF217Q8TC41 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNF217Q8TC41 AC026471.1-201ENST00000564629 3026 ntBASIC21.08■□□□□ 0.96
RNF217Q8TC41 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.08■□□□□ 0.96
RNF217Q8TC41 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.08■□□□□ 0.96
RNF217Q8TC41 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF217Q8TC41 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF217Q8TC41 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RNF217Q8TC41 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF217Q8TC41 AC004987.1-201ENST00000428627 508 ntBASIC21.07■□□□□ 0.96
RNF217Q8TC41 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF217Q8TC41 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.07■□□□□ 0.96
RNF217Q8TC41 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF217Q8TC41 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RNF217Q8TC41 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF217Q8TC41 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF217Q8TC41 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF217Q8TC41 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF217Q8TC41 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RNF217Q8TC41 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
RNF217Q8TC41 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF217Q8TC41 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF217Q8TC41 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF217Q8TC41 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RNF217Q8TC41 ATP5G2P3-201ENST00000429083 425 ntBASIC21.06■□□□□ 0.96
RNF217Q8TC41 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF217Q8TC41 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
RNF217Q8TC41 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
RNF217Q8TC41 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC21.06■□□□□ 0.96
RNF217Q8TC41 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RNF217Q8TC41 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RNF217Q8TC41 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
RNF217Q8TC41 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
RNF217Q8TC41 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.06■□□□□ 0.96
RNF217Q8TC41 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.06■□□□□ 0.96
RNF217Q8TC41 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
RNF217Q8TC41 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.05■□□□□ 0.96
RNF217Q8TC41 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.05■□□□□ 0.96
RNF217Q8TC41 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
RNF217Q8TC41 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF217Q8TC41 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF217Q8TC41 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF217Q8TC41 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF217Q8TC41 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF217Q8TC41 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.05■□□□□ 0.96
RNF217Q8TC41 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.05■□□□□ 0.96
RNF217Q8TC41 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF217Q8TC41 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF217Q8TC41 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF217Q8TC41 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF217Q8TC41 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.04■□□□□ 0.96
RNF217Q8TC41 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF217Q8TC41 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF217Q8TC41 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF217Q8TC41 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF217Q8TC41 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF217Q8TC41 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF217Q8TC41 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF217Q8TC41 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RNF217Q8TC41 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
RNF217Q8TC41 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
RNF217Q8TC41 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF217Q8TC41 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF217Q8TC41 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF217Q8TC41 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
RNF217Q8TC41 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
RNF217Q8TC41 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
RNF217Q8TC41 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF217Q8TC41 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RNF217Q8TC41 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RNF217Q8TC41 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF217Q8TC41 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF217Q8TC41 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF217Q8TC41 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC21.02■□□□□ 0.96
RNF217Q8TC41 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RNF217Q8TC41 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RNF217Q8TC41 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.02■□□□□ 0.96
RNF217Q8TC41 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF217Q8TC41 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.02■□□□□ 0.96
RNF217Q8TC41 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.02■□□□□ 0.96
RNF217Q8TC41 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.02■□□□□ 0.96
RNF217Q8TC41 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC21.02■□□□□ 0.95
RNF217Q8TC41 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF217Q8TC41 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF217Q8TC41 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF217Q8TC41 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
RNF217Q8TC41 TSPY13P-201ENST00000338964 914 ntBASIC21.01■□□□□ 0.95
RNF217Q8TC41 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF217Q8TC41 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RNF217Q8TC41 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.01■□□□□ 0.95
RNF217Q8TC41 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.01■□□□□ 0.95
RNF217Q8TC41 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RNF217Q8TC41 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF217Q8TC41 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RNF217Q8TC41 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21■□□□□ 0.95
RNF217Q8TC41 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
RNF217Q8TC41 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21■□□□□ 0.95
RNF217Q8TC41 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
RNF217Q8TC41 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms