Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDND2Q8NHS1 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDND2Q8NHS1 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLDND2Q8NHS1 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.76■□□□□ 0.59
CLDND2Q8NHS1 pRNA.6-201ENST00000610482 90 ntBASIC18.76■□□□□ 0.59
CLDND2Q8NHS1 pRNA.5-201ENST00000612139 90 ntBASIC18.76■□□□□ 0.59
CLDND2Q8NHS1 pRNA.11-201ENST00000618423 90 ntBASIC18.76■□□□□ 0.59
CLDND2Q8NHS1 pRNA.13-201ENST00000619112 90 ntBASIC18.76■□□□□ 0.59
CLDND2Q8NHS1 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CLDND2Q8NHS1 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDND2Q8NHS1 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CLDND2Q8NHS1 AC141586.4-201ENST00000624558 1573 ntBASIC18.76■□□□□ 0.59
CLDND2Q8NHS1 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDND2Q8NHS1 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CLDND2Q8NHS1 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDND2Q8NHS1 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDND2Q8NHS1 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLDND2Q8NHS1 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDND2Q8NHS1 AC026271.2-201ENST00000428091 497 ntBASIC18.75■□□□□ 0.59
CLDND2Q8NHS1 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.75■□□□□ 0.59
CLDND2Q8NHS1 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.75■□□□□ 0.59
CLDND2Q8NHS1 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDND2Q8NHS1 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDND2Q8NHS1 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CLDND2Q8NHS1 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDND2Q8NHS1 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.75■□□□□ 0.59
CLDND2Q8NHS1 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDND2Q8NHS1 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDND2Q8NHS1 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.74■□□□□ 0.59
CLDND2Q8NHS1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDND2Q8NHS1 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLDND2Q8NHS1 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.74■□□□□ 0.59
CLDND2Q8NHS1 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CLDND2Q8NHS1 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDND2Q8NHS1 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDND2Q8NHS1 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDND2Q8NHS1 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.73■□□□□ 0.59
CLDND2Q8NHS1 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CLDND2Q8NHS1 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDND2Q8NHS1 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDND2Q8NHS1 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.73■□□□□ 0.59
CLDND2Q8NHS1 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.73■□□□□ 0.59
CLDND2Q8NHS1 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLDND2Q8NHS1 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDND2Q8NHS1 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDND2Q8NHS1 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CLDND2Q8NHS1 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.73■□□□□ 0.59
CLDND2Q8NHS1 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDND2Q8NHS1 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CLDND2Q8NHS1 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDND2Q8NHS1 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.72■□□□□ 0.59
CLDND2Q8NHS1 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.72■□□□□ 0.59
CLDND2Q8NHS1 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDND2Q8NHS1 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.72■□□□□ 0.59
CLDND2Q8NHS1 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLDND2Q8NHS1 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDND2Q8NHS1 BX842568.3-201ENST00000418104 571 ntBASIC18.72■□□□□ 0.59
CLDND2Q8NHS1 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.72■□□□□ 0.59
CLDND2Q8NHS1 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.72■□□□□ 0.59
CLDND2Q8NHS1 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CLDND2Q8NHS1 AC233992.3-201ENST00000607491 485 ntBASIC18.72■□□□□ 0.59
CLDND2Q8NHS1 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.72■□□□□ 0.59
CLDND2Q8NHS1 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDND2Q8NHS1 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDND2Q8NHS1 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDND2Q8NHS1 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDND2Q8NHS1 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDND2Q8NHS1 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.71■□□□□ 0.59
CLDND2Q8NHS1 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDND2Q8NHS1 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDND2Q8NHS1 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.71■□□□□ 0.59
CLDND2Q8NHS1 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDND2Q8NHS1 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CLDND2Q8NHS1 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.71■□□□□ 0.59
CLDND2Q8NHS1 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLDND2Q8NHS1 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.71■□□□□ 0.59
CLDND2Q8NHS1 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.71■□□□□ 0.59
CLDND2Q8NHS1 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CLDND2Q8NHS1 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CLDND2Q8NHS1 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CLDND2Q8NHS1 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
CLDND2Q8NHS1 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDND2Q8NHS1 AL117328.2-201ENST00000624617 1940 ntBASIC18.7■□□□□ 0.58
CLDND2Q8NHS1 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDND2Q8NHS1 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDND2Q8NHS1 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDND2Q8NHS1 C9orf163-202ENST00000624034 2573 ntBASIC18.7■□□□□ 0.58
CLDND2Q8NHS1 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDND2Q8NHS1 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDND2Q8NHS1 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CLDND2Q8NHS1 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.7■□□□□ 0.58
CLDND2Q8NHS1 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLDND2Q8NHS1 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
CLDND2Q8NHS1 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLDND2Q8NHS1 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CLDND2Q8NHS1 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLDND2Q8NHS1 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDND2Q8NHS1 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.69■□□□□ 0.58
CLDND2Q8NHS1 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CLDND2Q8NHS1 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 210.7 ms