Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CPSF7Q8N684 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.63■■□□□ 1.05
CPSF7Q8N684 AC011551.1-201ENST00000614101 683 ntBASIC21.63■■□□□ 1.05
CPSF7Q8N684 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
CPSF7Q8N684 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.63■■□□□ 1.05
CPSF7Q8N684 AC092053.2-201ENST00000640557 1818 ntBASIC21.63■■□□□ 1.05
CPSF7Q8N684 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CPSF7Q8N684 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.63■■□□□ 1.05
CPSF7Q8N684 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.63■■□□□ 1.05
CPSF7Q8N684 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CPSF7Q8N684 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CPSF7Q8N684 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CPSF7Q8N684 C11orf96-202ENST00000528572 1834 ntBASIC21.62■■□□□ 1.05
CPSF7Q8N684 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CPSF7Q8N684 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CPSF7Q8N684 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CPSF7Q8N684 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CPSF7Q8N684 MIR4787-201ENST00000607364 84 ntBASIC21.62■■□□□ 1.05
CPSF7Q8N684 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CPSF7Q8N684 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CPSF7Q8N684 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CPSF7Q8N684 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.62■■□□□ 1.05
CPSF7Q8N684 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPSF7Q8N684 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPSF7Q8N684 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CPSF7Q8N684 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CPSF7Q8N684 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPSF7Q8N684 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.61■■□□□ 1.05
CPSF7Q8N684 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CPSF7Q8N684 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.61■■□□□ 1.05
CPSF7Q8N684 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPSF7Q8N684 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPSF7Q8N684 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPSF7Q8N684 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.6■■□□□ 1.05
CPSF7Q8N684 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.6■■□□□ 1.05
CPSF7Q8N684 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CPSF7Q8N684 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.6■■□□□ 1.05
CPSF7Q8N684 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPSF7Q8N684 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPSF7Q8N684 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.6■■□□□ 1.05
CPSF7Q8N684 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CPSF7Q8N684 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CPSF7Q8N684 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.59■■□□□ 1.05
CPSF7Q8N684 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CPSF7Q8N684 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CPSF7Q8N684 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CPSF7Q8N684 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.59■■□□□ 1.05
CPSF7Q8N684 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.59■■□□□ 1.05
CPSF7Q8N684 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CPSF7Q8N684 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CPSF7Q8N684 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
CPSF7Q8N684 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CPSF7Q8N684 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CPSF7Q8N684 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
CPSF7Q8N684 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
CPSF7Q8N684 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CPSF7Q8N684 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CPSF7Q8N684 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CPSF7Q8N684 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
CPSF7Q8N684 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
CPSF7Q8N684 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.57■■□□□ 1.04
CPSF7Q8N684 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.57■■□□□ 1.04
CPSF7Q8N684 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CPSF7Q8N684 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CPSF7Q8N684 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CPSF7Q8N684 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CPSF7Q8N684 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CPSF7Q8N684 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.57■■□□□ 1.04
CPSF7Q8N684 AC137630.3-201ENST00000607245 391 ntBASIC21.57■■□□□ 1.04
CPSF7Q8N684 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.57■■□□□ 1.04
CPSF7Q8N684 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CPSF7Q8N684 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CPSF7Q8N684 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CPSF7Q8N684 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CPSF7Q8N684 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CPSF7Q8N684 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CPSF7Q8N684 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.56■■□□□ 1.04
CPSF7Q8N684 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CPSF7Q8N684 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.56■■□□□ 1.04
CPSF7Q8N684 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CPSF7Q8N684 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
CPSF7Q8N684 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.56■■□□□ 1.04
CPSF7Q8N684 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.56■■□□□ 1.04
CPSF7Q8N684 MIR4281-201ENST00000580852 62 ntBASIC21.56■■□□□ 1.04
CPSF7Q8N684 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CPSF7Q8N684 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CPSF7Q8N684 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CPSF7Q8N684 AL024507.2-201ENST00000606070 2574 ntBASIC21.56■■□□□ 1.04
CPSF7Q8N684 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
CPSF7Q8N684 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.55■■□□□ 1.04
CPSF7Q8N684 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CPSF7Q8N684 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CPSF7Q8N684 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CPSF7Q8N684 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.55■■□□□ 1.04
CPSF7Q8N684 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.55■■□□□ 1.04
CPSF7Q8N684 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CPSF7Q8N684 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CPSF7Q8N684 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CPSF7Q8N684 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.55■■□□□ 1.04
CPSF7Q8N684 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms