Protein–RNA interactions for Protein: Q8N0S2

SYCE1, Synaptonemal complex central element protein 1, humanhuman

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE1Q8N0S2 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC23.41■■□□□ 1.34
SYCE1Q8N0S2 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC23.41■■□□□ 1.34
SYCE1Q8N0S2 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SYCE1Q8N0S2 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SYCE1Q8N0S2 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SYCE1Q8N0S2 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC23.41■■□□□ 1.34
SYCE1Q8N0S2 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23.41■■□□□ 1.34
SYCE1Q8N0S2 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
SYCE1Q8N0S2 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
SYCE1Q8N0S2 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC23.4■■□□□ 1.34
SYCE1Q8N0S2 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
SYCE1Q8N0S2 AC087742.1-201ENST00000575880 1738 ntBASIC23.4■■□□□ 1.34
SYCE1Q8N0S2 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
SYCE1Q8N0S2 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
SYCE1Q8N0S2 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC23.4■■□□□ 1.34
SYCE1Q8N0S2 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
SYCE1Q8N0S2 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
SYCE1Q8N0S2 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.4■■□□□ 1.34
SYCE1Q8N0S2 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC23.39■■□□□ 1.34
SYCE1Q8N0S2 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.34
SYCE1Q8N0S2 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.34
SYCE1Q8N0S2 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC23.39■■□□□ 1.33
SYCE1Q8N0S2 PKD1P6-201ENST00000343738 4769 ntBASIC23.39■■□□□ 1.33
SYCE1Q8N0S2 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC23.39■■□□□ 1.33
SYCE1Q8N0S2 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
SYCE1Q8N0S2 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
SYCE1Q8N0S2 AC080038.3-201ENST00000623346 1952 ntBASIC23.38■■□□□ 1.33
SYCE1Q8N0S2 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SYCE1Q8N0S2 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SYCE1Q8N0S2 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SYCE1Q8N0S2 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SYCE1Q8N0S2 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SYCE1Q8N0S2 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
SYCE1Q8N0S2 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SYCE1Q8N0S2 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
SYCE1Q8N0S2 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.38■■□□□ 1.33
SYCE1Q8N0S2 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SYCE1Q8N0S2 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC23.38■■□□□ 1.33
SYCE1Q8N0S2 LINC01529-204ENST00000636474 1715 ntBASIC23.38■■□□□ 1.33
SYCE1Q8N0S2 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SYCE1Q8N0S2 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.37■■□□□ 1.33
SYCE1Q8N0S2 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SYCE1Q8N0S2 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
SYCE1Q8N0S2 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SYCE1Q8N0S2 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SYCE1Q8N0S2 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC23.37■■□□□ 1.33
SYCE1Q8N0S2 BID-212ENST00000614949 1988 ntTSL 5 BASIC23.37■■□□□ 1.33
SYCE1Q8N0S2 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
SYCE1Q8N0S2 FP325331.1-202ENST00000623531 1380 ntBASIC23.37■■□□□ 1.33
SYCE1Q8N0S2 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SYCE1Q8N0S2 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
SYCE1Q8N0S2 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SYCE1Q8N0S2 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC23.36■■□□□ 1.33
SYCE1Q8N0S2 AC137630.3-201ENST00000607245 391 ntBASIC23.36■■□□□ 1.33
SYCE1Q8N0S2 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
SYCE1Q8N0S2 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC23.36■■□□□ 1.33
SYCE1Q8N0S2 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
SYCE1Q8N0S2 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC23.36■■□□□ 1.33
SYCE1Q8N0S2 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC23.35■■□□□ 1.33
SYCE1Q8N0S2 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SYCE1Q8N0S2 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SYCE1Q8N0S2 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SYCE1Q8N0S2 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC23.35■■□□□ 1.33
SYCE1Q8N0S2 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SYCE1Q8N0S2 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
SYCE1Q8N0S2 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
SYCE1Q8N0S2 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SYCE1Q8N0S2 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SYCE1Q8N0S2 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SYCE1Q8N0S2 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SYCE1Q8N0S2 YBX1P4-201ENST00000392794 808 ntBASIC23.34■■□□□ 1.33
SYCE1Q8N0S2 AC103834.1-201ENST00000520383 144 ntBASIC23.34■■□□□ 1.33
SYCE1Q8N0S2 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.34■■□□□ 1.33
SYCE1Q8N0S2 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
SYCE1Q8N0S2 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SYCE1Q8N0S2 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SYCE1Q8N0S2 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
SYCE1Q8N0S2 AC005703.6-201ENST00000623265 1329 ntBASIC23.33■■□□□ 1.33
SYCE1Q8N0S2 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC23.33■■□□□ 1.33
SYCE1Q8N0S2 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC23.33■■□□□ 1.33
SYCE1Q8N0S2 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SYCE1Q8N0S2 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
SYCE1Q8N0S2 TK2-216ENST00000564917 1156 ntTSL 3 BASIC23.33■■□□□ 1.33
SYCE1Q8N0S2 AC012354.3-201ENST00000623734 483 ntBASIC23.33■■□□□ 1.33
SYCE1Q8N0S2 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.33■■□□□ 1.33
SYCE1Q8N0S2 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
SYCE1Q8N0S2 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
SYCE1Q8N0S2 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC23.33■■□□□ 1.32
SYCE1Q8N0S2 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC23.32■■□□□ 1.32
SYCE1Q8N0S2 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SYCE1Q8N0S2 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
SYCE1Q8N0S2 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.32■■□□□ 1.32
SYCE1Q8N0S2 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC23.32■■□□□ 1.32
SYCE1Q8N0S2 AC103724.3-201ENST00000564481 992 ntBASIC23.32■■□□□ 1.32
SYCE1Q8N0S2 MIR6722-201ENST00000617286 78 ntBASIC23.32■■□□□ 1.32
SYCE1Q8N0S2 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SYCE1Q8N0S2 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
SYCE1Q8N0S2 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SYCE1Q8N0S2 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.31■■□□□ 1.32
SYCE1Q8N0S2 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.31■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms