Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LINC00346Q8IVM7 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
LINC00346Q8IVM7 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.56■□□□□ 0.72
LINC00346Q8IVM7 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
LINC00346Q8IVM7 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
LINC00346Q8IVM7 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
LINC00346Q8IVM7 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LINC00346Q8IVM7 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
LINC00346Q8IVM7 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LINC00346Q8IVM7 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LINC00346Q8IVM7 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LINC00346Q8IVM7 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.55■□□□□ 0.72
LINC00346Q8IVM7 UNC93B8-201ENST00000511903 705 ntBASIC19.55■□□□□ 0.72
LINC00346Q8IVM7 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
LINC00346Q8IVM7 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
LINC00346Q8IVM7 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.55■□□□□ 0.72
LINC00346Q8IVM7 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LINC00346Q8IVM7 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LINC00346Q8IVM7 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
LINC00346Q8IVM7 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LINC00346Q8IVM7 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LINC00346Q8IVM7 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
LINC00346Q8IVM7 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LINC00346Q8IVM7 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
LINC00346Q8IVM7 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LINC00346Q8IVM7 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.54■□□□□ 0.72
LINC00346Q8IVM7 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LINC00346Q8IVM7 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
LINC00346Q8IVM7 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
LINC00346Q8IVM7 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LINC00346Q8IVM7 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LINC00346Q8IVM7 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LINC00346Q8IVM7 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
LINC00346Q8IVM7 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LINC00346Q8IVM7 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
LINC00346Q8IVM7 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LINC00346Q8IVM7 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LINC00346Q8IVM7 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
LINC00346Q8IVM7 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LINC00346Q8IVM7 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
LINC00346Q8IVM7 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
LINC00346Q8IVM7 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LINC00346Q8IVM7 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.53■□□□□ 0.72
LINC00346Q8IVM7 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LINC00346Q8IVM7 FP325331.1-202ENST00000623531 1380 ntBASIC19.53■□□□□ 0.72
LINC00346Q8IVM7 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
LINC00346Q8IVM7 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LINC00346Q8IVM7 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
LINC00346Q8IVM7 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LINC00346Q8IVM7 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
LINC00346Q8IVM7 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LINC00346Q8IVM7 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
LINC00346Q8IVM7 ESRRAP2-201ENST00000418437 1549 ntBASIC19.52■□□□□ 0.72
LINC00346Q8IVM7 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.52■□□□□ 0.72
LINC00346Q8IVM7 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.52■□□□□ 0.72
LINC00346Q8IVM7 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.52■□□□□ 0.72
LINC00346Q8IVM7 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LINC00346Q8IVM7 AL035685.1-201ENST00000636663 812 ntBASIC19.52■□□□□ 0.72
LINC00346Q8IVM7 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
LINC00346Q8IVM7 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LINC00346Q8IVM7 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LINC00346Q8IVM7 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
LINC00346Q8IVM7 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
LINC00346Q8IVM7 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.52■□□□□ 0.71
LINC00346Q8IVM7 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.52■□□□□ 0.71
LINC00346Q8IVM7 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LINC00346Q8IVM7 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.51■□□□□ 0.71
LINC00346Q8IVM7 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LINC00346Q8IVM7 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
LINC00346Q8IVM7 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LINC00346Q8IVM7 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LINC00346Q8IVM7 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.51■□□□□ 0.71
LINC00346Q8IVM7 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.51■□□□□ 0.71
LINC00346Q8IVM7 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.51■□□□□ 0.71
LINC00346Q8IVM7 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LINC00346Q8IVM7 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LINC00346Q8IVM7 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LINC00346Q8IVM7 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LINC00346Q8IVM7 LINC00526-201ENST00000581067 1875 ntBASIC19.5■□□□□ 0.71
LINC00346Q8IVM7 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LINC00346Q8IVM7 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
LINC00346Q8IVM7 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
LINC00346Q8IVM7 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
LINC00346Q8IVM7 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.5■□□□□ 0.71
LINC00346Q8IVM7 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
LINC00346Q8IVM7 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
LINC00346Q8IVM7 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LINC00346Q8IVM7 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LINC00346Q8IVM7 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
LINC00346Q8IVM7 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.49■□□□□ 0.71
LINC00346Q8IVM7 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
LINC00346Q8IVM7 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
LINC00346Q8IVM7 ECEL1P1-201ENST00000373592 1742 ntBASIC19.49■□□□□ 0.71
LINC00346Q8IVM7 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.49■□□□□ 0.71
LINC00346Q8IVM7 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.49■□□□□ 0.71
LINC00346Q8IVM7 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LINC00346Q8IVM7 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LINC00346Q8IVM7 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LINC00346Q8IVM7 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LINC00346Q8IVM7 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms