Protein–RNA interactions for Protein: Q86T96

RNF180, E3 ubiquitin-protein ligase RNF180, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF180Q86T96 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
RNF180Q86T96 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
RNF180Q86T96 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
RNF180Q86T96 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
RNF180Q86T96 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
RNF180Q86T96 BID-214ENST00000617586 542 ntTSL 5 BASIC24.81■■□□□ 1.56
RNF180Q86T96 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
RNF180Q86T96 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
RNF180Q86T96 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC24.81■■□□□ 1.56
RNF180Q86T96 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
RNF180Q86T96 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
RNF180Q86T96 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
RNF180Q86T96 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC24.8■■□□□ 1.56
RNF180Q86T96 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
RNF180Q86T96 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
RNF180Q86T96 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC24.8■■□□□ 1.56
RNF180Q86T96 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
RNF180Q86T96 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC24.8■■□□□ 1.56
RNF180Q86T96 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
RNF180Q86T96 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
RNF180Q86T96 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
RNF180Q86T96 AP004607.4-201ENST00000530158 1459 ntBASIC24.79■■□□□ 1.56
RNF180Q86T96 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC24.79■■□□□ 1.56
RNF180Q86T96 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
RNF180Q86T96 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
RNF180Q86T96 EMC9-206ENST00000560403 872 ntTSL 2 BASIC24.79■■□□□ 1.56
RNF180Q86T96 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC24.79■■□□□ 1.56
RNF180Q86T96 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC24.79■■□□□ 1.56
RNF180Q86T96 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC24.79■■□□□ 1.56
RNF180Q86T96 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
RNF180Q86T96 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
RNF180Q86T96 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
RNF180Q86T96 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
RNF180Q86T96 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
RNF180Q86T96 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
RNF180Q86T96 PPP1R14BP3-201ENST00000509033 445 ntBASIC24.78■■□□□ 1.56
RNF180Q86T96 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
RNF180Q86T96 AC004854.2-201ENST00000608450 1441 ntBASIC24.78■■□□□ 1.56
RNF180Q86T96 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
RNF180Q86T96 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC24.77■■□□□ 1.56
RNF180Q86T96 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
RNF180Q86T96 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RNF180Q86T96 EI24-213ENST00000618552 1747 ntTSL 5 BASIC24.77■■□□□ 1.56
RNF180Q86T96 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
RNF180Q86T96 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
RNF180Q86T96 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
RNF180Q86T96 KRT19P1-201ENST00000405746 1186 ntBASIC24.76■■□□□ 1.55
RNF180Q86T96 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC24.76■■□□□ 1.55
RNF180Q86T96 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC24.76■■□□□ 1.55
RNF180Q86T96 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
RNF180Q86T96 AC104771.1-201ENST00000603335 964 ntBASIC24.76■■□□□ 1.55
RNF180Q86T96 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
RNF180Q86T96 BX005040.4-201ENST00000637145 1518 ntBASIC24.76■■□□□ 1.55
RNF180Q86T96 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
RNF180Q86T96 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC24.76■■□□□ 1.55
RNF180Q86T96 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RNF180Q86T96 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC24.75■■□□□ 1.55
RNF180Q86T96 AC006970.2-201ENST00000450065 779 ntBASIC24.75■■□□□ 1.55
RNF180Q86T96 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
RNF180Q86T96 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC24.75■■□□□ 1.55
RNF180Q86T96 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC24.75■■□□□ 1.55
RNF180Q86T96 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
RNF180Q86T96 AC022211.4-201ENST00000625094 2161 ntBASIC24.75■■□□□ 1.55
RNF180Q86T96 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RNF180Q86T96 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RNF180Q86T96 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
RNF180Q86T96 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
RNF180Q86T96 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
RNF180Q86T96 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
RNF180Q86T96 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
RNF180Q86T96 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
RNF180Q86T96 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC24.74■■□□□ 1.55
RNF180Q86T96 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC24.74■■□□□ 1.55
RNF180Q86T96 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC24.74■■□□□ 1.55
RNF180Q86T96 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC24.74■■□□□ 1.55
RNF180Q86T96 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
RNF180Q86T96 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
RNF180Q86T96 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
RNF180Q86T96 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
RNF180Q86T96 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC24.73■■□□□ 1.55
RNF180Q86T96 METTL26-203ENST00000397664 604 ntTSL 2 BASIC24.73■■□□□ 1.55
RNF180Q86T96 WWOX-218ENST00000627394 894 ntTSL 5 BASIC24.73■■□□□ 1.55
RNF180Q86T96 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
RNF180Q86T96 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
RNF180Q86T96 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
RNF180Q86T96 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC24.72■■□□□ 1.55
RNF180Q86T96 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC24.72■■□□□ 1.55
RNF180Q86T96 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
RNF180Q86T96 MAP2K4P1-201ENST00000438453 1195 ntBASIC24.72■■□□□ 1.55
RNF180Q86T96 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC24.72■■□□□ 1.55
RNF180Q86T96 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC24.72■■□□□ 1.55
RNF180Q86T96 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC24.72■■□□□ 1.55
RNF180Q86T96 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
RNF180Q86T96 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
RNF180Q86T96 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
RNF180Q86T96 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
RNF180Q86T96 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
RNF180Q86T96 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
RNF180Q86T96 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
RNF180Q86T96 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms