Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RFWD3Q6PCD5 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
RFWD3Q6PCD5 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RFWD3Q6PCD5 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
RFWD3Q6PCD5 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
RFWD3Q6PCD5 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RFWD3Q6PCD5 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RFWD3Q6PCD5 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
RFWD3Q6PCD5 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.06■■□□□ 1.28
RFWD3Q6PCD5 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.06■■□□□ 1.28
RFWD3Q6PCD5 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC23.06■■□□□ 1.28
RFWD3Q6PCD5 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RFWD3Q6PCD5 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
RFWD3Q6PCD5 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RFWD3Q6PCD5 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.06■■□□□ 1.28
RFWD3Q6PCD5 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.06■■□□□ 1.28
RFWD3Q6PCD5 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RFWD3Q6PCD5 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
RFWD3Q6PCD5 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.05■■□□□ 1.28
RFWD3Q6PCD5 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.05■■□□□ 1.28
RFWD3Q6PCD5 LINC01529-204ENST00000636474 1715 ntBASIC23.05■■□□□ 1.28
RFWD3Q6PCD5 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RFWD3Q6PCD5 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RFWD3Q6PCD5 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RFWD3Q6PCD5 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RFWD3Q6PCD5 AF213884.3-201ENST00000563833 479 ntBASIC23.05■■□□□ 1.28
RFWD3Q6PCD5 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.05■■□□□ 1.28
RFWD3Q6PCD5 AC136469.2-201ENST00000623944 1028 ntBASIC23.05■■□□□ 1.28
RFWD3Q6PCD5 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
RFWD3Q6PCD5 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
RFWD3Q6PCD5 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RFWD3Q6PCD5 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RFWD3Q6PCD5 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC23.04■■□□□ 1.28
RFWD3Q6PCD5 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RFWD3Q6PCD5 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RFWD3Q6PCD5 AP001330.3-201ENST00000520123 633 ntBASIC23.04■■□□□ 1.28
RFWD3Q6PCD5 DUX4L4-201ENST00000566884 1269 ntBASIC23.04■■□□□ 1.28
RFWD3Q6PCD5 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.04■■□□□ 1.28
RFWD3Q6PCD5 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.04■■□□□ 1.28
RFWD3Q6PCD5 AL136967.2-201ENST00000623968 743 ntBASIC23.04■■□□□ 1.28
RFWD3Q6PCD5 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RFWD3Q6PCD5 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.04■■□□□ 1.28
RFWD3Q6PCD5 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.04■■□□□ 1.28
RFWD3Q6PCD5 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RFWD3Q6PCD5 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
RFWD3Q6PCD5 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.04■■□□□ 1.28
RFWD3Q6PCD5 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.04■■□□□ 1.28
RFWD3Q6PCD5 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RFWD3Q6PCD5 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RFWD3Q6PCD5 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RFWD3Q6PCD5 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
RFWD3Q6PCD5 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.03■■□□□ 1.28
RFWD3Q6PCD5 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RFWD3Q6PCD5 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.03■■□□□ 1.28
RFWD3Q6PCD5 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
RFWD3Q6PCD5 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RFWD3Q6PCD5 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RFWD3Q6PCD5 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
RFWD3Q6PCD5 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
RFWD3Q6PCD5 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RFWD3Q6PCD5 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RFWD3Q6PCD5 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
RFWD3Q6PCD5 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.02■■□□□ 1.28
RFWD3Q6PCD5 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC23.02■■□□□ 1.28
RFWD3Q6PCD5 MAG-206ENST00000597035 542 ntTSL 4 BASIC23.02■■□□□ 1.28
RFWD3Q6PCD5 C9orf163-202ENST00000624034 2573 ntBASIC23.02■■□□□ 1.28
RFWD3Q6PCD5 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RFWD3Q6PCD5 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RFWD3Q6PCD5 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC23.02■■□□□ 1.28
RFWD3Q6PCD5 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC23.02■■□□□ 1.28
RFWD3Q6PCD5 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RFWD3Q6PCD5 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RFWD3Q6PCD5 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
RFWD3Q6PCD5 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
RFWD3Q6PCD5 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.01■■□□□ 1.27
RFWD3Q6PCD5 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
RFWD3Q6PCD5 MIR939-201ENST00000401314 82 ntBASIC23.01■■□□□ 1.27
RFWD3Q6PCD5 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.01■■□□□ 1.27
RFWD3Q6PCD5 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC23.01■■□□□ 1.27
RFWD3Q6PCD5 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC23.01■■□□□ 1.27
RFWD3Q6PCD5 AC008764.7-201ENST00000593779 1081 ntBASIC23.01■■□□□ 1.27
RFWD3Q6PCD5 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
RFWD3Q6PCD5 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC23.01■■□□□ 1.27
RFWD3Q6PCD5 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
RFWD3Q6PCD5 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC23■■□□□ 1.27
RFWD3Q6PCD5 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23■■□□□ 1.27
RFWD3Q6PCD5 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23■■□□□ 1.27
RFWD3Q6PCD5 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RFWD3Q6PCD5 AC133637.1-201ENST00000624115 1537 ntBASIC23■■□□□ 1.27
RFWD3Q6PCD5 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RFWD3Q6PCD5 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
RFWD3Q6PCD5 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC23■■□□□ 1.27
RFWD3Q6PCD5 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
RFWD3Q6PCD5 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23■■□□□ 1.27
RFWD3Q6PCD5 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
RFWD3Q6PCD5 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
RFWD3Q6PCD5 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
RFWD3Q6PCD5 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
RFWD3Q6PCD5 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RFWD3Q6PCD5 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms