Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC23.17■■□□□ 1.3
PTCRAQ6ISU1 SLC29A4P1-201ENST00000398760 971 ntBASIC23.17■■□□□ 1.3
PTCRAQ6ISU1 AC069152.1-201ENST00000438030 544 ntBASIC23.17■■□□□ 1.3
PTCRAQ6ISU1 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC23.17■■□□□ 1.3
PTCRAQ6ISU1 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC23.17■■□□□ 1.3
PTCRAQ6ISU1 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC23.17■■□□□ 1.3
PTCRAQ6ISU1 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC23.17■■□□□ 1.3
PTCRAQ6ISU1 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PTCRAQ6ISU1 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.16■■□□□ 1.3
PTCRAQ6ISU1 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
PTCRAQ6ISU1 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.16■■□□□ 1.3
PTCRAQ6ISU1 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PTCRAQ6ISU1 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
PTCRAQ6ISU1 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC23.16■■□□□ 1.3
PTCRAQ6ISU1 AC087239.1-201ENST00000622671 572 ntBASIC23.16■■□□□ 1.3
PTCRAQ6ISU1 TBCB-214ENST00000629269 413 ntTSL 5 BASIC23.16■■□□□ 1.3
PTCRAQ6ISU1 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
PTCRAQ6ISU1 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.15■■□□□ 1.3
PTCRAQ6ISU1 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC23.15■■□□□ 1.3
PTCRAQ6ISU1 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.15■■□□□ 1.3
PTCRAQ6ISU1 FP325331.1-202ENST00000623531 1380 ntBASIC23.15■■□□□ 1.3
PTCRAQ6ISU1 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PTCRAQ6ISU1 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PTCRAQ6ISU1 METTL15-202ENST00000403099 795 ntTSL 5 BASIC23.15■■□□□ 1.3
PTCRAQ6ISU1 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC23.15■■□□□ 1.3
PTCRAQ6ISU1 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC23.15■■□□□ 1.3
PTCRAQ6ISU1 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
PTCRAQ6ISU1 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PTCRAQ6ISU1 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.15■■□□□ 1.3
PTCRAQ6ISU1 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.15■■□□□ 1.3
PTCRAQ6ISU1 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PTCRAQ6ISU1 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.3
PTCRAQ6ISU1 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
PTCRAQ6ISU1 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
PTCRAQ6ISU1 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
PTCRAQ6ISU1 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC23.14■■□□□ 1.3
PTCRAQ6ISU1 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
PTCRAQ6ISU1 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
PTCRAQ6ISU1 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
PTCRAQ6ISU1 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PTCRAQ6ISU1 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PTCRAQ6ISU1 OAS3-207ENST00000551007 998 ntTSL 2 BASIC23.14■■□□□ 1.29
PTCRAQ6ISU1 AC231657.2-201ENST00000624556 255 ntBASIC23.14■■□□□ 1.29
PTCRAQ6ISU1 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.14■■□□□ 1.29
PTCRAQ6ISU1 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.14■■□□□ 1.29
PTCRAQ6ISU1 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PTCRAQ6ISU1 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC23.14■■□□□ 1.29
PTCRAQ6ISU1 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.14■■□□□ 1.29
PTCRAQ6ISU1 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PTCRAQ6ISU1 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PTCRAQ6ISU1 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PTCRAQ6ISU1 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PTCRAQ6ISU1 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.13■■□□□ 1.29
PTCRAQ6ISU1 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC23.13■■□□□ 1.29
PTCRAQ6ISU1 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC23.13■■□□□ 1.29
PTCRAQ6ISU1 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC23.13■■□□□ 1.29
PTCRAQ6ISU1 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC23.13■■□□□ 1.29
PTCRAQ6ISU1 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PTCRAQ6ISU1 AC005181.1-201ENST00000604782 1256 ntBASIC23.13■■□□□ 1.29
PTCRAQ6ISU1 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
PTCRAQ6ISU1 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PTCRAQ6ISU1 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.13■■□□□ 1.29
PTCRAQ6ISU1 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PTCRAQ6ISU1 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PTCRAQ6ISU1 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PTCRAQ6ISU1 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
PTCRAQ6ISU1 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PTCRAQ6ISU1 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
PTCRAQ6ISU1 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.12■■□□□ 1.29
PTCRAQ6ISU1 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC23.12■■□□□ 1.29
PTCRAQ6ISU1 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PTCRAQ6ISU1 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
PTCRAQ6ISU1 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PTCRAQ6ISU1 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.11■■□□□ 1.29
PTCRAQ6ISU1 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.11■■□□□ 1.29
PTCRAQ6ISU1 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PTCRAQ6ISU1 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PTCRAQ6ISU1 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
PTCRAQ6ISU1 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PTCRAQ6ISU1 AC007322.1-201ENST00000426983 750 ntBASIC23.11■■□□□ 1.29
PTCRAQ6ISU1 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
PTCRAQ6ISU1 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
PTCRAQ6ISU1 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PTCRAQ6ISU1 SHF-206ENST00000560471 2499 ntTSL 5 BASIC23.11■■□□□ 1.29
PTCRAQ6ISU1 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PTCRAQ6ISU1 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC23.1■■□□□ 1.29
PTCRAQ6ISU1 AC133041.1-202ENST00000642053 222 ntBASIC23.1■■□□□ 1.29
PTCRAQ6ISU1 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PTCRAQ6ISU1 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.1■■□□□ 1.29
PTCRAQ6ISU1 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC23.1■■□□□ 1.29
PTCRAQ6ISU1 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
PTCRAQ6ISU1 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
PTCRAQ6ISU1 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PTCRAQ6ISU1 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PTCRAQ6ISU1 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PTCRAQ6ISU1 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC23.09■■□□□ 1.29
PTCRAQ6ISU1 AC079140.4-201ENST00000507448 529 ntBASIC23.09■■□□□ 1.29
PTCRAQ6ISU1 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC23.09■■□□□ 1.29
PTCRAQ6ISU1 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
PTCRAQ6ISU1 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms