Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC25.57■■□□□ 1.68
COL13A1Q5TAT6 AC083880.1-201ENST00000608266 535 ntBASIC25.57■■□□□ 1.68
COL13A1Q5TAT6 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC25.57■■□□□ 1.68
COL13A1Q5TAT6 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
COL13A1Q5TAT6 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
COL13A1Q5TAT6 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
COL13A1Q5TAT6 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
COL13A1Q5TAT6 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC25.56■■□□□ 1.68
COL13A1Q5TAT6 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC25.56■■□□□ 1.68
COL13A1Q5TAT6 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC25.56■■□□□ 1.68
COL13A1Q5TAT6 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC25.56■■□□□ 1.68
COL13A1Q5TAT6 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC25.56■■□□□ 1.68
COL13A1Q5TAT6 AL359736.2-201ENST00000621992 437 ntBASIC25.56■■□□□ 1.68
COL13A1Q5TAT6 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
COL13A1Q5TAT6 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
COL13A1Q5TAT6 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
COL13A1Q5TAT6 PARP1-202ENST00000366792 553 ntTSL 3 BASIC25.55■■□□□ 1.68
COL13A1Q5TAT6 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC25.55■■□□□ 1.68
COL13A1Q5TAT6 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC25.55■■□□□ 1.68
COL13A1Q5TAT6 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC25.55■■□□□ 1.68
COL13A1Q5TAT6 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC25.55■■□□□ 1.68
COL13A1Q5TAT6 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC25.55■■□□□ 1.68
COL13A1Q5TAT6 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC25.55■■□□□ 1.68
COL13A1Q5TAT6 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
COL13A1Q5TAT6 BRWD1-AS2-201ENST00000603064 1028 ntBASIC25.55■■□□□ 1.68
COL13A1Q5TAT6 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
COL13A1Q5TAT6 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
COL13A1Q5TAT6 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
COL13A1Q5TAT6 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
COL13A1Q5TAT6 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC25.54■■□□□ 1.68
COL13A1Q5TAT6 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
COL13A1Q5TAT6 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC25.54■■□□□ 1.68
COL13A1Q5TAT6 CNN2P6-201ENST00000439038 900 ntBASIC25.54■■□□□ 1.68
COL13A1Q5TAT6 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC25.54■■□□□ 1.68
COL13A1Q5TAT6 C2orf69P4-201ENST00000565394 541 ntBASIC25.54■■□□□ 1.68
COL13A1Q5TAT6 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC25.54■■□□□ 1.68
COL13A1Q5TAT6 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
COL13A1Q5TAT6 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC25.53■■□□□ 1.68
COL13A1Q5TAT6 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
COL13A1Q5TAT6 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
COL13A1Q5TAT6 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
COL13A1Q5TAT6 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
COL13A1Q5TAT6 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
COL13A1Q5TAT6 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC25.53■■□□□ 1.68
COL13A1Q5TAT6 APTR-203ENST00000430801 583 ntTSL 5 BASIC25.53■■□□□ 1.68
COL13A1Q5TAT6 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC25.53■■□□□ 1.68
COL13A1Q5TAT6 Z99916.2-201ENST00000604037 246 ntBASIC25.53■■□□□ 1.68
COL13A1Q5TAT6 MARS-234ENST00000630571 216 ntTSL 5 BASIC25.53■■□□□ 1.68
COL13A1Q5TAT6 MARS-235ENST00000630803 183 ntTSL 3 BASIC25.53■■□□□ 1.68
COL13A1Q5TAT6 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
COL13A1Q5TAT6 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
COL13A1Q5TAT6 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
COL13A1Q5TAT6 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
COL13A1Q5TAT6 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
COL13A1Q5TAT6 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
COL13A1Q5TAT6 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC25.52■■□□□ 1.68
COL13A1Q5TAT6 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
COL13A1Q5TAT6 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC25.52■■□□□ 1.68
COL13A1Q5TAT6 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC25.52■■□□□ 1.68
COL13A1Q5TAT6 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
COL13A1Q5TAT6 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC25.52■■□□□ 1.68
COL13A1Q5TAT6 BX005040.4-201ENST00000637145 1518 ntBASIC25.52■■□□□ 1.68
COL13A1Q5TAT6 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
COL13A1Q5TAT6 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
COL13A1Q5TAT6 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
COL13A1Q5TAT6 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
COL13A1Q5TAT6 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
COL13A1Q5TAT6 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC25.51■■□□□ 1.67
COL13A1Q5TAT6 OR2I1P-207ENST00000453522 948 ntBASIC25.51■■□□□ 1.67
COL13A1Q5TAT6 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC25.51■■□□□ 1.67
COL13A1Q5TAT6 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
COL13A1Q5TAT6 UBE2DNL-204ENST00000602536 740 ntBASIC25.51■■□□□ 1.67
COL13A1Q5TAT6 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC25.51■■□□□ 1.67
COL13A1Q5TAT6 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
COL13A1Q5TAT6 AC141586.4-201ENST00000624558 1573 ntBASIC25.51■■□□□ 1.67
COL13A1Q5TAT6 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25.51■■□□□ 1.67
COL13A1Q5TAT6 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
COL13A1Q5TAT6 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC25.5■■□□□ 1.67
COL13A1Q5TAT6 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
COL13A1Q5TAT6 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
COL13A1Q5TAT6 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
COL13A1Q5TAT6 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
COL13A1Q5TAT6 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC25.5■■□□□ 1.67
COL13A1Q5TAT6 AC133561.5-201ENST00000635547 218 ntBASIC25.5■■□□□ 1.67
COL13A1Q5TAT6 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
COL13A1Q5TAT6 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
COL13A1Q5TAT6 AC142472.1-201ENST00000612013 1741 ntBASIC25.49■■□□□ 1.67
COL13A1Q5TAT6 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC25.49■■□□□ 1.67
COL13A1Q5TAT6 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
COL13A1Q5TAT6 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC25.49■■□□□ 1.67
COL13A1Q5TAT6 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
COL13A1Q5TAT6 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
COL13A1Q5TAT6 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
COL13A1Q5TAT6 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC25.48■■□□□ 1.67
COL13A1Q5TAT6 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
COL13A1Q5TAT6 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC25.48■■□□□ 1.67
COL13A1Q5TAT6 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC25.48■■□□□ 1.67
COL13A1Q5TAT6 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC25.48■■□□□ 1.67
COL13A1Q5TAT6 STK32C-205ENST00000456004 607 ntTSL 2 BASIC25.48■■□□□ 1.67
COL13A1Q5TAT6 BRI3-207ENST00000539286 699 ntTSL 2 BASIC25.48■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms