Protein–RNA interactions for Protein: Q56A73

SPIN4, Spindlin-4, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN4Q56A73 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.14■□□□□ 0.98
SPIN4Q56A73 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
SPIN4Q56A73 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.14■□□□□ 0.97
SPIN4Q56A73 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SPIN4Q56A73 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.14■□□□□ 0.97
SPIN4Q56A73 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SPIN4Q56A73 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SPIN4Q56A73 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
SPIN4Q56A73 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SPIN4Q56A73 AC242852.2-201ENST00000615738 1807 ntBASIC21.13■□□□□ 0.97
SPIN4Q56A73 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SPIN4Q56A73 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SPIN4Q56A73 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
SPIN4Q56A73 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
SPIN4Q56A73 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.13■□□□□ 0.97
SPIN4Q56A73 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SPIN4Q56A73 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
SPIN4Q56A73 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SPIN4Q56A73 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.12■□□□□ 0.97
SPIN4Q56A73 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
SPIN4Q56A73 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.12■□□□□ 0.97
SPIN4Q56A73 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.12■□□□□ 0.97
SPIN4Q56A73 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
SPIN4Q56A73 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.12■□□□□ 0.97
SPIN4Q56A73 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SPIN4Q56A73 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SPIN4Q56A73 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SPIN4Q56A73 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SPIN4Q56A73 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.11■□□□□ 0.97
SPIN4Q56A73 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SPIN4Q56A73 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SPIN4Q56A73 AL117332.1-201ENST00000622628 974 ntBASIC21.11■□□□□ 0.97
SPIN4Q56A73 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
SPIN4Q56A73 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
SPIN4Q56A73 LINC00526-201ENST00000581067 1875 ntBASIC21.11■□□□□ 0.97
SPIN4Q56A73 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
SPIN4Q56A73 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SPIN4Q56A73 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
SPIN4Q56A73 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.1■□□□□ 0.97
SPIN4Q56A73 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
SPIN4Q56A73 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SPIN4Q56A73 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SPIN4Q56A73 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.1■□□□□ 0.97
SPIN4Q56A73 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
SPIN4Q56A73 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.1■□□□□ 0.97
SPIN4Q56A73 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SPIN4Q56A73 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.1■□□□□ 0.97
SPIN4Q56A73 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SPIN4Q56A73 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.1■□□□□ 0.97
SPIN4Q56A73 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.1■□□□□ 0.97
SPIN4Q56A73 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
SPIN4Q56A73 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SPIN4Q56A73 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SPIN4Q56A73 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SPIN4Q56A73 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SPIN4Q56A73 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
SPIN4Q56A73 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.09■□□□□ 0.97
SPIN4Q56A73 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.09■□□□□ 0.97
SPIN4Q56A73 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SPIN4Q56A73 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SPIN4Q56A73 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SPIN4Q56A73 GUSBP5-201ENST00000418136 578 ntBASIC21.09■□□□□ 0.97
SPIN4Q56A73 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.09■□□□□ 0.97
SPIN4Q56A73 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SPIN4Q56A73 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SPIN4Q56A73 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SPIN4Q56A73 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SPIN4Q56A73 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.09■□□□□ 0.97
SPIN4Q56A73 EP400NL-214ENST00000641289 2402 ntBASIC21.08■□□□□ 0.97
SPIN4Q56A73 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.08■□□□□ 0.97
SPIN4Q56A73 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SPIN4Q56A73 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SPIN4Q56A73 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
SPIN4Q56A73 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SPIN4Q56A73 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
SPIN4Q56A73 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.08■□□□□ 0.97
SPIN4Q56A73 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
SPIN4Q56A73 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SPIN4Q56A73 AC087742.1-201ENST00000575880 1738 ntBASIC21.08■□□□□ 0.97
SPIN4Q56A73 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
SPIN4Q56A73 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SPIN4Q56A73 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
SPIN4Q56A73 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
SPIN4Q56A73 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SPIN4Q56A73 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.07■□□□□ 0.96
SPIN4Q56A73 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
SPIN4Q56A73 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SPIN4Q56A73 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
SPIN4Q56A73 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SPIN4Q56A73 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
SPIN4Q56A73 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SPIN4Q56A73 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.07■□□□□ 0.96
SPIN4Q56A73 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SPIN4Q56A73 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.07■□□□□ 0.96
SPIN4Q56A73 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SPIN4Q56A73 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SPIN4Q56A73 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.06■□□□□ 0.96
SPIN4Q56A73 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SPIN4Q56A73 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
SPIN4Q56A73 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms