Protein–RNA interactions for Protein: Q494X3

ZNF404, Zinc finger protein 404, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404Q494X3 AC139530.1-201ENST00000575312 1977 ntBASIC19.98■□□□□ 0.79
ZNF404Q494X3 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.98■□□□□ 0.79
ZNF404Q494X3 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.98■□□□□ 0.79
ZNF404Q494X3 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF404Q494X3 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF404Q494X3 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF404Q494X3 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF404Q494X3 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF404Q494X3 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF404Q494X3 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.98■□□□□ 0.79
ZNF404Q494X3 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
ZNF404Q494X3 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.97■□□□□ 0.79
ZNF404Q494X3 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.97■□□□□ 0.79
ZNF404Q494X3 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF404Q494X3 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF404Q494X3 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF404Q494X3 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF404Q494X3 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF404Q494X3 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
ZNF404Q494X3 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
ZNF404Q494X3 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.97■□□□□ 0.79
ZNF404Q494X3 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
ZNF404Q494X3 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
ZNF404Q494X3 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF404Q494X3 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF404Q494X3 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF404Q494X3 AC092667.1-201ENST00000434301 2586 ntBASIC19.96■□□□□ 0.79
ZNF404Q494X3 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF404Q494X3 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
ZNF404Q494X3 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF404Q494X3 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.96■□□□□ 0.79
ZNF404Q494X3 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF404Q494X3 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF404Q494X3 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.96■□□□□ 0.79
ZNF404Q494X3 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.96■□□□□ 0.79
ZNF404Q494X3 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.96■□□□□ 0.79
ZNF404Q494X3 AC019171.1-201ENST00000601251 1056 ntBASIC19.96■□□□□ 0.79
ZNF404Q494X3 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF404Q494X3 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF404Q494X3 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF404Q494X3 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF404Q494X3 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF404Q494X3 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.95■□□□□ 0.78
ZNF404Q494X3 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF404Q494X3 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF404Q494X3 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF404Q494X3 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.95■□□□□ 0.78
ZNF404Q494X3 LONRF2P2-201ENST00000439212 571 ntBASIC19.95■□□□□ 0.78
ZNF404Q494X3 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.95■□□□□ 0.78
ZNF404Q494X3 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.95■□□□□ 0.78
ZNF404Q494X3 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF404Q494X3 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF404Q494X3 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF404Q494X3 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
ZNF404Q494X3 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF404Q494X3 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF404Q494X3 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.94■□□□□ 0.78
ZNF404Q494X3 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
ZNF404Q494X3 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.94■□□□□ 0.78
ZNF404Q494X3 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF404Q494X3 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
ZNF404Q494X3 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
ZNF404Q494X3 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF404Q494X3 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.94■□□□□ 0.78
ZNF404Q494X3 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF404Q494X3 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.94■□□□□ 0.78
ZNF404Q494X3 PVT1_1.1-201ENST00000615125 194 ntBASIC19.94■□□□□ 0.78
ZNF404Q494X3 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF404Q494X3 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF404Q494X3 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.94■□□□□ 0.78
ZNF404Q494X3 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.94■□□□□ 0.78
ZNF404Q494X3 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF404Q494X3 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.94■□□□□ 0.78
ZNF404Q494X3 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
ZNF404Q494X3 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.94■□□□□ 0.78
ZNF404Q494X3 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
ZNF404Q494X3 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF404Q494X3 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.93■□□□□ 0.78
ZNF404Q494X3 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF404Q494X3 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF404Q494X3 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
ZNF404Q494X3 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
ZNF404Q494X3 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.93■□□□□ 0.78
ZNF404Q494X3 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF404Q494X3 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF404Q494X3 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF404Q494X3 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
ZNF404Q494X3 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF404Q494X3 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF404Q494X3 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.92■□□□□ 0.78
ZNF404Q494X3 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF404Q494X3 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF404Q494X3 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF404Q494X3 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF404Q494X3 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.92■□□□□ 0.78
ZNF404Q494X3 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
ZNF404Q494X3 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF404Q494X3 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZNF404Q494X3 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.91■□□□□ 0.78
ZNF404Q494X3 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms