Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
PCGF3Q3KNV8 AC005703.6-201ENST00000623265 1329 ntBASIC19.5■□□□□ 0.71
PCGF3Q3KNV8 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCGF3Q3KNV8 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCGF3Q3KNV8 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCGF3Q3KNV8 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.49■□□□□ 0.71
PCGF3Q3KNV8 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.49■□□□□ 0.71
PCGF3Q3KNV8 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCGF3Q3KNV8 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCGF3Q3KNV8 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCGF3Q3KNV8 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCGF3Q3KNV8 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PCGF3Q3KNV8 AC008406.3-201ENST00000620001 1374 ntBASIC19.49■□□□□ 0.71
PCGF3Q3KNV8 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCGF3Q3KNV8 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.49■□□□□ 0.71
PCGF3Q3KNV8 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.49■□□□□ 0.71
PCGF3Q3KNV8 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCGF3Q3KNV8 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCGF3Q3KNV8 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCGF3Q3KNV8 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCGF3Q3KNV8 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
PCGF3Q3KNV8 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCGF3Q3KNV8 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.48■□□□□ 0.71
PCGF3Q3KNV8 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.48■□□□□ 0.71
PCGF3Q3KNV8 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCGF3Q3KNV8 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCGF3Q3KNV8 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCGF3Q3KNV8 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCGF3Q3KNV8 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.48■□□□□ 0.71
PCGF3Q3KNV8 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCGF3Q3KNV8 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.48■□□□□ 0.71
PCGF3Q3KNV8 ECEL1P1-201ENST00000373592 1742 ntBASIC19.48■□□□□ 0.71
PCGF3Q3KNV8 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCGF3Q3KNV8 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCGF3Q3KNV8 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.47■□□□□ 0.71
PCGF3Q3KNV8 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCGF3Q3KNV8 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.47■□□□□ 0.71
PCGF3Q3KNV8 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.47■□□□□ 0.71
PCGF3Q3KNV8 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCGF3Q3KNV8 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCGF3Q3KNV8 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCGF3Q3KNV8 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.47■□□□□ 0.71
PCGF3Q3KNV8 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCGF3Q3KNV8 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCGF3Q3KNV8 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.47■□□□□ 0.71
PCGF3Q3KNV8 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCGF3Q3KNV8 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
PCGF3Q3KNV8 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCGF3Q3KNV8 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.47■□□□□ 0.71
PCGF3Q3KNV8 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.47■□□□□ 0.71
PCGF3Q3KNV8 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCGF3Q3KNV8 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.46■□□□□ 0.71
PCGF3Q3KNV8 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.46■□□□□ 0.71
PCGF3Q3KNV8 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.46■□□□□ 0.71
PCGF3Q3KNV8 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCGF3Q3KNV8 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.46■□□□□ 0.71
PCGF3Q3KNV8 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCGF3Q3KNV8 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.46■□□□□ 0.71
PCGF3Q3KNV8 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.46■□□□□ 0.71
PCGF3Q3KNV8 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCGF3Q3KNV8 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.46■□□□□ 0.71
PCGF3Q3KNV8 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCGF3Q3KNV8 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.46■□□□□ 0.71
PCGF3Q3KNV8 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.46■□□□□ 0.71
PCGF3Q3KNV8 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCGF3Q3KNV8 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCGF3Q3KNV8 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCGF3Q3KNV8 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCGF3Q3KNV8 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCGF3Q3KNV8 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.45■□□□□ 0.7
PCGF3Q3KNV8 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCGF3Q3KNV8 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PCGF3Q3KNV8 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.45■□□□□ 0.7
PCGF3Q3KNV8 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.45■□□□□ 0.7
PCGF3Q3KNV8 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.45■□□□□ 0.7
PCGF3Q3KNV8 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.45■□□□□ 0.7
PCGF3Q3KNV8 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.45■□□□□ 0.7
PCGF3Q3KNV8 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCGF3Q3KNV8 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.45■□□□□ 0.7
PCGF3Q3KNV8 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCGF3Q3KNV8 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCGF3Q3KNV8 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
PCGF3Q3KNV8 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PCGF3Q3KNV8 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCGF3Q3KNV8 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCGF3Q3KNV8 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PCGF3Q3KNV8 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCGF3Q3KNV8 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCGF3Q3KNV8 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCGF3Q3KNV8 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PCGF3Q3KNV8 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCGF3Q3KNV8 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCGF3Q3KNV8 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCGF3Q3KNV8 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCGF3Q3KNV8 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.44■□□□□ 0.7
PCGF3Q3KNV8 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCGF3Q3KNV8 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
PCGF3Q3KNV8 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCGF3Q3KNV8 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PCGF3Q3KNV8 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms