Protein–RNA interactions for Protein: Q08109

HRD1, ERAD-associated E3 ubiquitin-protein ligase HRD1, yeastyeast

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD1Q08109 ALG9YNL219C 1668 nt3.39□□□□□ -1.87
HRD1Q08109 GDH2YDL215C 3279 nt3.39□□□□□ -1.87
HRD1Q08109 SWP82YFL049W 1872 nt3.39□□□□□ -1.87
HRD1Q08109 HEF3YNL014W 3135 nt3.39□□□□□ -1.87
HRD1Q08109 SPC19YDR201W 498 nt3.39□□□□□ -1.87
HRD1Q08109 PAM18YLR008C 507 nt3.39□□□□□ -1.87
HRD1Q08109 ATG17YLR423C 1254 nt3.39□□□□□ -1.87
HRD1Q08109 DSS4YPR017C 432 nt3.39□□□□□ -1.87
HRD1Q08109 FYV5YCL058C 459 nt3.39□□□□□ -1.87
HRD1Q08109 ACE2YLR131C 2313 nt3.39□□□□□ -1.87
HRD1Q08109 RCM1YNL022C 1473 nt3.39□□□□□ -1.87
HRD1Q08109 PEP7YDR323C 1548 nt3.39□□□□□ -1.87
HRD1Q08109 MST1YKL194C 1389 nt3.38□□□□□ -1.87
HRD1Q08109 YCR075W-AYCR075W-A 228 nt3.38□□□□□ -1.87
HRD1Q08109 PHM6YDR281C 315 nt3.38□□□□□ -1.87
HRD1Q08109 PDX1YGR193C 1233 nt3.38□□□□□ -1.87
HRD1Q08109 ACP1YKL192C 378 nt3.38□□□□□ -1.87
HRD1Q08109 RPS19AYOL121C 435 nt3.38□□□□□ -1.87
HRD1Q08109 SPT16YGL207W 3108 nt3.38□□□□□ -1.87
HRD1Q08109 HCA4YJL033W 2313 nt3.38□□□□□ -1.87
HRD1Q08109 CHD1YER164W 4407 nt3.38□□□□□ -1.87
HRD1Q08109 RTT103YDR289C 1230 nt3.37□□□□□ -1.87
HRD1Q08109 API2YDR525W 330 nt3.37□□□□□ -1.87
HRD1Q08109 YDR526CYDR526C 471 nt3.37□□□□□ -1.87
HRD1Q08109 YAE1YJR067C 426 nt3.37□□□□□ -1.87
HRD1Q08109 TAF11YML015C 1041 nt3.37□□□□□ -1.87
HRD1Q08109 YMR114CYMR114C 1107 nt3.37□□□□□ -1.87
HRD1Q08109 YBR056W-AYBR056W-A 201 nt3.37□□□□□ -1.87
HRD1Q08109 GDT1YBR187W 843 nt3.37□□□□□ -1.87
HRD1Q08109 STP22YCL008C 1158 nt3.37□□□□□ -1.87
HRD1Q08109 APL4YPR029C 2499 nt3.37□□□□□ -1.87
HRD1Q08109 FOX2YKR009C 2703 nt3.37□□□□□ -1.87
HRD1Q08109 NSP1YJL041W 2472 nt3.36□□□□□ -1.87
HRD1Q08109 RTS1YOR014W 2274 nt3.36□□□□□ -1.87
HRD1Q08109 RSC58YLR033W 1509 nt3.36□□□□□ -1.87
HRD1Q08109 SNM1YDR478W 597 nt3.36□□□□□ -1.87
HRD1Q08109 KRE28YDR532C 1158 nt3.36□□□□□ -1.87
HRD1Q08109 RPL18BYNL301C 561 nt3.36□□□□□ -1.87
HRD1Q08109 REB1YBR049C 2433 nt3.36□□□□□ -1.87
HRD1Q08109 ZDS1YMR273C 2748 nt3.36□□□□□ -1.87
HRD1Q08109 ENT1YDL161W 1365 nt3.36□□□□□ -1.87
HRD1Q08109 GSH2YOL049W 1476 nt3.35□□□□□ -1.87
HRD1Q08109 BCH2YKR027W 2298 nt3.35□□□□□ -1.87
HRD1Q08109 PAD1YDR538W 729 nt3.35□□□□□ -1.87
HRD1Q08109 SLX8YER116C 825 nt3.35□□□□□ -1.87
HRD1Q08109 tX(XXX)DtX(XXX)D 100 nt3.35□□□□□ -1.87
HRD1Q08109 snR17asnR17a 333 nt3.35□□□□□ -1.87
HRD1Q08109 KRI1YNL308C 1776 nt3.35□□□□□ -1.87
HRD1Q08109 EMC1YCL045C 2283 nt3.35□□□□□ -1.87
HRD1Q08109 BOI2YER114C 3123 nt3.35□□□□□ -1.87
HRD1Q08109 ARO1YDR127W 4767 nt3.34□□□□□ -1.87
HRD1Q08109 DIN7YDR263C 1293 nt3.34□□□□□ -1.87
HRD1Q08109 MIG3YER028C 1185 nt3.34□□□□□ -1.87
HRD1Q08109 UBC6YER100W 753 nt3.34□□□□□ -1.87
HRD1Q08109 YJL211CYJL211C 444 nt3.34□□□□□ -1.87
HRD1Q08109 YLR428CYLR428C 345 nt3.34□□□□□ -1.87
HRD1Q08109 IDH2YOR136W 1110 nt3.34□□□□□ -1.87
HRD1Q08109 NCR1YPL006W 3513 nt3.34□□□□□ -1.87
HRD1Q08109 PPZ1YML016C 2079 nt3.34□□□□□ -1.88
HRD1Q08109 ALO1YML086C 1581 nt3.34□□□□□ -1.88
HRD1Q08109 SRP72YPL210C 1923 nt3.33□□□□□ -1.88
HRD1Q08109 MTC4YBR255W 2085 nt3.33□□□□□ -1.88
HRD1Q08109 YDR230WYDR230W 348 nt3.33□□□□□ -1.88
HRD1Q08109 YDR246W-AYDR246W-A 201 nt3.33□□□□□ -1.88
HRD1Q08109 BUD25YER014C-A 462 nt3.33□□□□□ -1.88
HRD1Q08109 YJR038CYJR038C 363 nt3.33□□□□□ -1.88
HRD1Q08109 YAR023CYAR023C 540 nt3.33□□□□□ -1.88
HRD1Q08109 FLC1YPL221W 2382 nt3.33□□□□□ -1.88
HRD1Q08109 LOS1YKL205W 3303 nt3.32□□□□□ -1.88
HRD1Q08109 YER076CYER076C 909 nt3.32□□□□□ -1.88
HRD1Q08109 YFR045WYFR045W 930 nt3.32□□□□□ -1.88
HRD1Q08109 CAP2YIL034C 864 nt3.32□□□□□ -1.88
HRD1Q08109 ARG80YMR042W 534 nt3.32□□□□□ -1.88
HRD1Q08109 NRK1YNL129W 723 nt3.32□□□□□ -1.88
HRD1Q08109 UTP23YOR004W 765 nt3.32□□□□□ -1.88
HRD1Q08109 ELC1YPL046C 300 nt3.32□□□□□ -1.88
HRD1Q08109 INA17YPL099C 549 nt3.32□□□□□ -1.88
HRD1Q08109 MDL1YLR188W 2088 nt3.32□□□□□ -1.88
HRD1Q08109 ERB1YMR049C 2424 nt3.32□□□□□ -1.88
HRD1Q08109 YBR225WYBR225W 2703 nt3.32□□□□□ -1.88
HRD1Q08109 RAD26YJR035W 3258 nt3.32□□□□□ -1.88
HRD1Q08109 STU1YBL034C 4542 nt3.31□□□□□ -1.88
HRD1Q08109 RPB2YOR151C 3675 nt3.31□□□□□ -1.88
HRD1Q08109 YJR030CYJR030C 2238 nt3.31□□□□□ -1.88
HRD1Q08109 AIM21YIR003W 2040 nt3.31□□□□□ -1.88
HRD1Q08109 GEM1YAL048C 1989 nt3.31□□□□□ -1.88
HRD1Q08109 APP1YNL094W 1764 nt3.31□□□□□ -1.88
HRD1Q08109 YDR445CYDR445C 408 nt3.31□□□□□ -1.88
HRD1Q08109 OSW5YMR148W 447 nt3.31□□□□□ -1.88
HRD1Q08109 RPC19YNL113W 429 nt3.31□□□□□ -1.88
HRD1Q08109 SNF8YPL002C 702 nt3.31□□□□□ -1.88
HRD1Q08109 FDH2YPL275W 711 nt3.31□□□□□ -1.88
HRD1Q08109 TMN2YDR107C 2019 nt3.31□□□□□ -1.88
HRD1Q08109 ATG32YIL146C 1590 nt3.3□□□□□ -1.88
HRD1Q08109 OCT1YKL134C 2319 nt3.3□□□□□ -1.88
HRD1Q08109 YFT2YDR319C 825 nt3.3□□□□□ -1.88
HRD1Q08109 YDR431WYDR431W 312 nt3.3□□□□□ -1.88
HRD1Q08109 YGL199CYGL199C 471 nt3.3□□□□□ -1.88
HRD1Q08109 FMP48YGR052W 1110 nt3.3□□□□□ -1.88
HRD1Q08109 MMM1YLL006W 1281 nt3.3□□□□□ -1.88
Retrieved 100 of 7,029 protein–RNA pairs in 26.6 ms