Protein–RNA interactions for Protein: P62979

RPS27A, Ubiquitin-40S ribosomal protein S27a, humanhuman

Known RBP Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27AP62979 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.01■□□□□ 0.63
RPS27AP62979 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
RPS27AP62979 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
RPS27AP62979 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPS27AP62979 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
RPS27AP62979 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RPS27AP62979 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPS27AP62979 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPS27AP62979 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RPS27AP62979 ABHD17AP5-201ENST00000580133 923 ntBASIC19.01■□□□□ 0.63
RPS27AP62979 NTF6A-201ENST00000591175 560 ntBASIC19.01■□□□□ 0.63
RPS27AP62979 BHLHE23-202ENST00000612929 1109 ntBASIC19.01■□□□□ 0.63
RPS27AP62979 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
RPS27AP62979 AC074183.2-201ENST00000623112 922 ntBASIC19.01■□□□□ 0.63
RPS27AP62979 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.01■□□□□ 0.63
RPS27AP62979 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RPS27AP62979 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
RPS27AP62979 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPS27AP62979 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPS27AP62979 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
RPS27AP62979 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RPS27AP62979 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RPS27AP62979 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19■□□□□ 0.63
RPS27AP62979 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19■□□□□ 0.63
RPS27AP62979 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19■□□□□ 0.63
RPS27AP62979 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19■□□□□ 0.63
RPS27AP62979 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19■□□□□ 0.63
RPS27AP62979 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
RPS27AP62979 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RPS27AP62979 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RPS27AP62979 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19■□□□□ 0.63
RPS27AP62979 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
RPS27AP62979 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
RPS27AP62979 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19■□□□□ 0.63
RPS27AP62979 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19■□□□□ 0.63
RPS27AP62979 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RPS27AP62979 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPS27AP62979 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.99■□□□□ 0.63
RPS27AP62979 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPS27AP62979 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.99■□□□□ 0.63
RPS27AP62979 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPS27AP62979 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPS27AP62979 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPS27AP62979 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.99■□□□□ 0.63
RPS27AP62979 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPS27AP62979 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPS27AP62979 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.99■□□□□ 0.63
RPS27AP62979 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPS27AP62979 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPS27AP62979 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RPS27AP62979 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC18.98■□□□□ 0.63
RPS27AP62979 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPS27AP62979 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RPS27AP62979 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.98■□□□□ 0.63
RPS27AP62979 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.98■□□□□ 0.63
RPS27AP62979 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RPS27AP62979 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPS27AP62979 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPS27AP62979 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.97■□□□□ 0.63
RPS27AP62979 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RPS27AP62979 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPS27AP62979 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPS27AP62979 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
RPS27AP62979 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
RPS27AP62979 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.97■□□□□ 0.63
RPS27AP62979 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC18.97■□□□□ 0.63
RPS27AP62979 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RPS27AP62979 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC18.97■□□□□ 0.63
RPS27AP62979 PVT1_1.1-201ENST00000615125 194 ntBASIC18.97■□□□□ 0.63
RPS27AP62979 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPS27AP62979 AL137060.1-201ENST00000618151 2648 ntBASIC18.97■□□□□ 0.63
RPS27AP62979 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.97■□□□□ 0.63
RPS27AP62979 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
RPS27AP62979 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RPS27AP62979 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPS27AP62979 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
RPS27AP62979 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.96■□□□□ 0.63
RPS27AP62979 BRD4-212ENST00000630599 726 ntTSL 2 BASIC18.96■□□□□ 0.63
RPS27AP62979 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.96■□□□□ 0.63
RPS27AP62979 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
RPS27AP62979 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RPS27AP62979 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPS27AP62979 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
RPS27AP62979 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.96■□□□□ 0.63
RPS27AP62979 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPS27AP62979 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.96■□□□□ 0.63
RPS27AP62979 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.95■□□□□ 0.62
RPS27AP62979 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RPS27AP62979 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPS27AP62979 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
RPS27AP62979 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPS27AP62979 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.95■□□□□ 0.62
RPS27AP62979 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPS27AP62979 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
RPS27AP62979 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RPS27AP62979 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RPS27AP62979 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPS27AP62979 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
RPS27AP62979 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPS27AP62979 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms