Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.58■□□□□ 0.89
RPS3AP61247 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RPS3AP61247 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.58■□□□□ 0.89
RPS3AP61247 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RPS3AP61247 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.58■□□□□ 0.89
RPS3AP61247 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RPS3AP61247 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
RPS3AP61247 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.58■□□□□ 0.88
RPS3AP61247 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
RPS3AP61247 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.58■□□□□ 0.88
RPS3AP61247 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.58■□□□□ 0.88
RPS3AP61247 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RPS3AP61247 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RPS3AP61247 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.57■□□□□ 0.88
RPS3AP61247 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPS3AP61247 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RPS3AP61247 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.57■□□□□ 0.88
RPS3AP61247 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPS3AP61247 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPS3AP61247 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPS3AP61247 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
RPS3AP61247 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.57■□□□□ 0.88
RPS3AP61247 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.57■□□□□ 0.88
RPS3AP61247 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.57■□□□□ 0.88
RPS3AP61247 AL117332.1-201ENST00000622628 974 ntBASIC20.57■□□□□ 0.88
RPS3AP61247 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.57■□□□□ 0.88
RPS3AP61247 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPS3AP61247 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPS3AP61247 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RPS3AP61247 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPS3AP61247 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RPS3AP61247 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RPS3AP61247 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.56■□□□□ 0.88
RPS3AP61247 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RPS3AP61247 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.56■□□□□ 0.88
RPS3AP61247 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RPS3AP61247 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.56■□□□□ 0.88
RPS3AP61247 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.56■□□□□ 0.88
RPS3AP61247 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPS3AP61247 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPS3AP61247 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPS3AP61247 MIR3621-201ENST00000580529 85 ntBASIC20.56■□□□□ 0.88
RPS3AP61247 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RPS3AP61247 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPS3AP61247 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RPS3AP61247 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
RPS3AP61247 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
RPS3AP61247 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RPS3AP61247 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.55■□□□□ 0.88
RPS3AP61247 AL137060.1-201ENST00000618151 2648 ntBASIC20.55■□□□□ 0.88
RPS3AP61247 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.55■□□□□ 0.88
RPS3AP61247 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.55■□□□□ 0.88
RPS3AP61247 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPS3AP61247 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
RPS3AP61247 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPS3AP61247 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
RPS3AP61247 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RPS3AP61247 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPS3AP61247 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPS3AP61247 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RPS3AP61247 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.54■□□□□ 0.88
RPS3AP61247 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RPS3AP61247 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPS3AP61247 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPS3AP61247 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPS3AP61247 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPS3AP61247 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.54■□□□□ 0.88
RPS3AP61247 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.54■□□□□ 0.88
RPS3AP61247 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.54■□□□□ 0.88
RPS3AP61247 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.54■□□□□ 0.88
RPS3AP61247 AC008406.3-201ENST00000620001 1374 ntBASIC20.54■□□□□ 0.88
RPS3AP61247 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.54■□□□□ 0.88
RPS3AP61247 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RPS3AP61247 AC092667.1-201ENST00000434301 2586 ntBASIC20.53■□□□□ 0.88
RPS3AP61247 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.53■□□□□ 0.88
RPS3AP61247 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RPS3AP61247 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPS3AP61247 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPS3AP61247 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.53■□□□□ 0.88
RPS3AP61247 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPS3AP61247 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RPS3AP61247 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.53■□□□□ 0.88
RPS3AP61247 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.53■□□□□ 0.88
RPS3AP61247 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
RPS3AP61247 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.53■□□□□ 0.88
RPS3AP61247 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.53■□□□□ 0.88
RPS3AP61247 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPS3AP61247 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPS3AP61247 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPS3AP61247 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPS3AP61247 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RPS3AP61247 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RPS3AP61247 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RPS3AP61247 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.52■□□□□ 0.88
RPS3AP61247 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RPS3AP61247 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RPS3AP61247 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.52■□□□□ 0.88
RPS3AP61247 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RPS3AP61247 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
RPS3AP61247 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms