Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RIPPLY3P57055 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RIPPLY3P57055 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RIPPLY3P57055 RARRES2P4-201ENST00000514074 484 ntBASIC18.34■□□□□ 0.53
RIPPLY3P57055 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
RIPPLY3P57055 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RIPPLY3P57055 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RIPPLY3P57055 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.33■□□□□ 0.53
RIPPLY3P57055 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.33■□□□□ 0.53
RIPPLY3P57055 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
RIPPLY3P57055 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RIPPLY3P57055 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RIPPLY3P57055 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.33■□□□□ 0.52
RIPPLY3P57055 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.33■□□□□ 0.52
RIPPLY3P57055 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.33■□□□□ 0.52
RIPPLY3P57055 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RIPPLY3P57055 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
RIPPLY3P57055 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RIPPLY3P57055 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC18.33■□□□□ 0.52
RIPPLY3P57055 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC18.33■□□□□ 0.52
RIPPLY3P57055 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RIPPLY3P57055 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC18.33■□□□□ 0.52
RIPPLY3P57055 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RIPPLY3P57055 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RIPPLY3P57055 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RIPPLY3P57055 AC090877.2-201ENST00000558441 1738 ntBASIC18.32■□□□□ 0.52
RIPPLY3P57055 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RIPPLY3P57055 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.32■□□□□ 0.52
RIPPLY3P57055 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RIPPLY3P57055 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
RIPPLY3P57055 ESRRAP1-201ENST00000400596 1257 ntBASIC18.32■□□□□ 0.52
RIPPLY3P57055 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.32■□□□□ 0.52
RIPPLY3P57055 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.32■□□□□ 0.52
RIPPLY3P57055 AF201337.1-201ENST00000520239 748 ntBASIC18.32■□□□□ 0.52
RIPPLY3P57055 AC098934.4-201ENST00000564127 592 ntBASIC18.32■□□□□ 0.52
RIPPLY3P57055 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.32■□□□□ 0.52
RIPPLY3P57055 MFSD11-216ENST00000590393 1141 ntBASIC18.32■□□□□ 0.52
RIPPLY3P57055 AL445228.2-201ENST00000605589 952 ntBASIC18.32■□□□□ 0.52
RIPPLY3P57055 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.32■□□□□ 0.52
RIPPLY3P57055 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RIPPLY3P57055 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RIPPLY3P57055 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RIPPLY3P57055 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
RIPPLY3P57055 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RIPPLY3P57055 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
RIPPLY3P57055 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.31■□□□□ 0.52
RIPPLY3P57055 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RIPPLY3P57055 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.31■□□□□ 0.52
RIPPLY3P57055 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.31■□□□□ 0.52
RIPPLY3P57055 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.31■□□□□ 0.52
RIPPLY3P57055 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.31■□□□□ 0.52
RIPPLY3P57055 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RIPPLY3P57055 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.31■□□□□ 0.52
RIPPLY3P57055 MIR4497-201ENST00000583208 89 ntBASIC18.31■□□□□ 0.52
RIPPLY3P57055 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RIPPLY3P57055 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.31■□□□□ 0.52
RIPPLY3P57055 pRNA.6-201ENST00000610482 90 ntBASIC18.31■□□□□ 0.52
RIPPLY3P57055 pRNA.5-201ENST00000612139 90 ntBASIC18.31■□□□□ 0.52
RIPPLY3P57055 pRNA.11-201ENST00000618423 90 ntBASIC18.31■□□□□ 0.52
RIPPLY3P57055 pRNA.13-201ENST00000619112 90 ntBASIC18.31■□□□□ 0.52
RIPPLY3P57055 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RIPPLY3P57055 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
RIPPLY3P57055 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RIPPLY3P57055 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RIPPLY3P57055 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RIPPLY3P57055 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
RIPPLY3P57055 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RIPPLY3P57055 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RIPPLY3P57055 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.3■□□□□ 0.52
RIPPLY3P57055 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RIPPLY3P57055 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.3■□□□□ 0.52
RIPPLY3P57055 BX255925.1-201ENST00000566954 1854 ntBASIC18.3■□□□□ 0.52
RIPPLY3P57055 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RIPPLY3P57055 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
RIPPLY3P57055 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.3■□□□□ 0.52
RIPPLY3P57055 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RIPPLY3P57055 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RIPPLY3P57055 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RIPPLY3P57055 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RIPPLY3P57055 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RIPPLY3P57055 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RIPPLY3P57055 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RIPPLY3P57055 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
RIPPLY3P57055 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RIPPLY3P57055 UBE2SP1-201ENST00000450587 669 ntBASIC18.29■□□□□ 0.52
RIPPLY3P57055 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RIPPLY3P57055 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.29■□□□□ 0.52
RIPPLY3P57055 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.29■□□□□ 0.52
RIPPLY3P57055 AC105233.4-201ENST00000642045 216 ntBASIC18.29■□□□□ 0.52
RIPPLY3P57055 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RIPPLY3P57055 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RIPPLY3P57055 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RIPPLY3P57055 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RIPPLY3P57055 UNC93B5-201ENST00000530315 699 ntBASIC18.28■□□□□ 0.52
RIPPLY3P57055 AC006058.3-201ENST00000606217 1069 ntBASIC18.28■□□□□ 0.52
RIPPLY3P57055 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RIPPLY3P57055 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RIPPLY3P57055 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
RIPPLY3P57055 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RIPPLY3P57055 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms