Protein–RNA interactions for Protein: P53538

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, yeastyeast

Predicted RBP Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSU72P53538 ABP140YOR239W 1887 nt3.58□□□□□ -1.84
SSU72P53538 YHR214WYHR214W 612 nt3.58□□□□□ -1.84
SSU72P53538 RSM25YIL093C 795 nt3.58□□□□□ -1.84
SSU72P53538 YAR066WYAR066W 612 nt3.58□□□□□ -1.84
SSU72P53538 CIN5YOR028C 888 nt3.58□□□□□ -1.84
SSU72P53538 YDC1YPL087W 954 nt3.58□□□□□ -1.84
SSU72P53538 YPL088WYPL088W 1029 nt3.58□□□□□ -1.84
SSU72P53538 POC4YPL144W 447 nt3.58□□□□□ -1.84
SSU72P53538 YKL050CYKL050C 2769 nt3.58□□□□□ -1.84
SSU72P53538 ORC4YPR162C 1590 nt3.58□□□□□ -1.84
SSU72P53538 MRPL7YDR237W 879 nt3.57□□□□□ -1.84
SSU72P53538 VPS73YGL104C 1461 nt3.57□□□□□ -1.84
SSU72P53538 tR(ACG)JtR(ACG)J 73 nt3.57□□□□□ -1.84
SSU72P53538 DHR2YKL078W 2208 nt3.57□□□□□ -1.84
SSU72P53538 PTA1YAL043C 2358 nt3.57□□□□□ -1.84
SSU72P53538 YNL296WYNL296W 315 nt3.57□□□□□ -1.84
SSU72P53538 YOL079WYOL079W 399 nt3.57□□□□□ -1.84
SSU72P53538 YPL025CYPL025C 558 nt3.57□□□□□ -1.84
SSU72P53538 BSD2YBR290W 966 nt3.57□□□□□ -1.84
SSU72P53538 GAL11YOL051W 3246 nt3.57□□□□□ -1.84
SSU72P53538 MNL1YHR204W 2391 nt3.56□□□□□ -1.84
SSU72P53538 VMA1YDL185W 3216 nt3.56□□□□□ -1.84
SSU72P53538 IOC4YMR044W 1428 nt3.56□□□□□ -1.84
SSU72P53538 PCL6YER059W 1263 nt3.56□□□□□ -1.84
SSU72P53538 BUD13YGL174W 801 nt3.56□□□□□ -1.84
SSU72P53538 MRPL25YGR076C 474 nt3.56□□□□□ -1.84
SSU72P53538 TPP1YMR156C 717 nt3.56□□□□□ -1.84
SSU72P53538 IST1YNL265C 897 nt3.56□□□□□ -1.84
SSU72P53538 FMP25YLR077W 1752 nt3.56□□□□□ -1.84
SSU72P53538 SUC2YIL162W 1599 nt3.55□□□□□ -1.84
SSU72P53538 HEF3YNL014W 3135 nt3.55□□□□□ -1.84
SSU72P53538 SPR6YER115C 576 nt3.55□□□□□ -1.84
SSU72P53538 YIL171WYIL171W 330 nt3.55□□□□□ -1.84
SSU72P53538 NMA1YLR328W 1206 nt3.55□□□□□ -1.84
SSU72P53538 RNA1YMR235C 1224 nt3.55□□□□□ -1.84
SSU72P53538 SUA7YPR086W 1038 nt3.55□□□□□ -1.84
SSU72P53538 SYT1YPR095C 3681 nt3.55□□□□□ -1.84
SSU72P53538 STU1YBL034C 4542 nt3.55□□□□□ -1.84
SSU72P53538 MUM3YOR298W 1440 nt3.54□□□□□ -1.84
SSU72P53538 ALE1YOR175C 1860 nt3.54□□□□□ -1.84
SSU72P53538 VID27YNL212W 2349 nt3.54□□□□□ -1.84
SSU72P53538 YTM1YOR272W 1383 nt3.54□□□□□ -1.84
SSU72P53538 PMT6YGR199W 2280 nt3.54□□□□□ -1.84
SSU72P53538 DXO1YDR370C 1329 nt3.54□□□□□ -1.84
SSU72P53538 YDL094CYDL094C 510 nt3.54□□□□□ -1.84
SSU72P53538 YAR030CYAR030C 342 nt3.54□□□□□ -1.84
SSU72P53538 YNL217WYNL217W 981 nt3.54□□□□□ -1.84
SSU72P53538 UBP10YNL186W 2379 nt3.54□□□□□ -1.84
SSU72P53538 IMD4YML056C 1575 nt3.54□□□□□ -1.84
SSU72P53538 BRE4YDL231C 3378 nt3.54□□□□□ -1.84
SSU72P53538 YLR177WYLR177W 1887 nt3.54□□□□□ -1.84
SSU72P53538 YCR023CYCR023C 1836 nt3.54□□□□□ -1.84
SSU72P53538 PHO12YHR215W 1404 nt3.53□□□□□ -1.84
SSU72P53538 PHO11YAR071W 1404 nt3.53□□□□□ -1.84
SSU72P53538 REB1YBR049C 2433 nt3.53□□□□□ -1.84
SSU72P53538 YDR444WYDR444W 2064 nt3.53□□□□□ -1.84
SSU72P53538 PUB1YNL016W 1362 nt3.53□□□□□ -1.84
SSU72P53538 SET4YJL105W 1683 nt3.53□□□□□ -1.84
SSU72P53538 ZRC1YMR243C 1329 nt3.53□□□□□ -1.84
SSU72P53538 YDR056CYDR056C 618 nt3.53□□□□□ -1.84
SSU72P53538 RRP1YDR087C 837 nt3.53□□□□□ -1.84
SSU72P53538 HSP42YDR171W 1128 nt3.53□□□□□ -1.84
SSU72P53538 AAD6YFL056C 639 nt3.53□□□□□ -1.84
SSU72P53538 BNA6YFR047C 888 nt3.53□□□□□ -1.84
SSU72P53538 YGR079WYGR079W 1113 nt3.53□□□□□ -1.84
SSU72P53538 YHI9YHR029C 885 nt3.53□□□□□ -1.84
SSU72P53538 CIA2YHR122W 696 nt3.53□□□□□ -1.84
SSU72P53538 SPO12YHR152W 522 nt3.53□□□□□ -1.84
SSU72P53538 SRN2YLR119W 642 nt3.53□□□□□ -1.84
SSU72P53538 UBA3YPR066W 900 nt3.53□□□□□ -1.84
SSU72P53538 CKS1YBR135W 453 nt3.53□□□□□ -1.84
SSU72P53538 CHD1YER164W 4407 nt3.53□□□□□ -1.84
SSU72P53538 RPO21YDL140C 5202 nt3.52□□□□□ -1.85
SSU72P53538 RPS18AYDR450W 441 nt3.52□□□□□ -1.85
SSU72P53538 HSP31YDR533C 714 nt3.52□□□□□ -1.85
SSU72P53538 MIG3YER028C 1185 nt3.52□□□□□ -1.85
SSU72P53538 YJR096WYJR096W 849 nt3.52□□□□□ -1.85
SSU72P53538 ATG33YLR356W 594 nt3.52□□□□□ -1.85
SSU72P53538 PRX1YBL064C 786 nt3.52□□□□□ -1.85
SSU72P53538 GLO4YOR040W 858 nt3.52□□□□□ -1.85
SSU72P53538 RGS2YOR107W 930 nt3.52□□□□□ -1.85
SSU72P53538 YBR016WYBR016W 387 nt3.52□□□□□ -1.85
SSU72P53538 YOR289WYOR289W 756 nt3.52□□□□□ -1.85
SSU72P53538 SPO19YPL130W 672 nt3.52□□□□□ -1.85
SSU72P53538 YCF1YDR135C 4548 nt3.52□□□□□ -1.85
SSU72P53538 MTC4YBR255W 2085 nt3.51□□□□□ -1.85
SSU72P53538 HOYDL227C 1761 nt3.51□□□□□ -1.85
SSU72P53538 RPL24AYGL031C 468 nt3.51□□□□□ -1.85
SSU72P53538 POG1YIL122W 1056 nt3.51□□□□□ -1.85
SSU72P53538 YAL056C-AYAL056C-A 351 nt3.51□□□□□ -1.85
SSU72P53538 CDC73YLR418C 1182 nt3.51□□□□□ -1.85
SSU72P53538 YMR105W-AYMR105W-A 195 nt3.51□□□□□ -1.85
SSU72P53538 HMT1YBR034C 1047 nt3.51□□□□□ -1.85
SSU72P53538 RAD17YOR368W 1206 nt3.51□□□□□ -1.85
SSU72P53538 YPL014WYPL014W 1146 nt3.51□□□□□ -1.85
SSU72P53538 MGR2YPL098C 342 nt3.51□□□□□ -1.85
SSU72P53538 YPR071WYPR071W 636 nt3.51□□□□□ -1.85
SSU72P53538 SVF1YDR346C 1446 nt3.51□□□□□ -1.85
SSU72P53538 YIL001WYIL001W 1542 nt3.5□□□□□ -1.85
SSU72P53538 BIK1YCL029C 1323 nt3.5□□□□□ -1.85
Retrieved 100 of 7,029 protein–RNA pairs in 16.6 ms