Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.71■□□□□ 0.75
SLC25A1P53007 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC25A1P53007 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC25A1P53007 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLC25A1P53007 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.71■□□□□ 0.75
SLC25A1P53007 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.71■□□□□ 0.75
SLC25A1P53007 DUX4L4-201ENST00000566884 1269 ntBASIC19.71■□□□□ 0.75
SLC25A1P53007 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.71■□□□□ 0.75
SLC25A1P53007 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC25A1P53007 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.71■□□□□ 0.75
SLC25A1P53007 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC25A1P53007 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC25A1P53007 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC25A1P53007 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.74
SLC25A1P53007 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC25A1P53007 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SLC25A1P53007 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.7■□□□□ 0.74
SLC25A1P53007 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SLC25A1P53007 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SLC25A1P53007 AC009086.3-201ENST00000623486 1008 ntBASIC19.7■□□□□ 0.74
SLC25A1P53007 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC25A1P53007 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SLC25A1P53007 AC080038.3-201ENST00000623346 1952 ntBASIC19.7■□□□□ 0.74
SLC25A1P53007 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SLC25A1P53007 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SLC25A1P53007 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
SLC25A1P53007 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC25A1P53007 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SLC25A1P53007 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC25A1P53007 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SLC25A1P53007 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC25A1P53007 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC25A1P53007 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC25A1P53007 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
SLC25A1P53007 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.69■□□□□ 0.74
SLC25A1P53007 AC092028.1-203ENST00000608262 953 ntBASIC19.69■□□□□ 0.74
SLC25A1P53007 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC25A1P53007 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SLC25A1P53007 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC25A1P53007 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SLC25A1P53007 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.69■□□□□ 0.74
SLC25A1P53007 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC25A1P53007 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
SLC25A1P53007 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC25A1P53007 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC25A1P53007 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
SLC25A1P53007 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC25A1P53007 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC25A1P53007 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC25A1P53007 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SLC25A1P53007 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.68■□□□□ 0.74
SLC25A1P53007 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.68■□□□□ 0.74
SLC25A1P53007 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC25A1P53007 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC25A1P53007 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC25A1P53007 C11orf96-202ENST00000528572 1834 ntBASIC19.67■□□□□ 0.74
SLC25A1P53007 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLC25A1P53007 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SLC25A1P53007 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC25A1P53007 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLC25A1P53007 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC25A1P53007 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
SLC25A1P53007 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.67■□□□□ 0.74
SLC25A1P53007 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SLC25A1P53007 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SLC25A1P53007 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.66■□□□□ 0.74
SLC25A1P53007 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC25A1P53007 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC25A1P53007 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC25A1P53007 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC25A1P53007 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.66■□□□□ 0.74
SLC25A1P53007 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.66■□□□□ 0.74
SLC25A1P53007 Z92544.1-202ENST00000571933 1220 ntBASIC19.66■□□□□ 0.74
SLC25A1P53007 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC25A1P53007 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SLC25A1P53007 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC25A1P53007 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC25A1P53007 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SLC25A1P53007 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC25A1P53007 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC25A1P53007 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SLC25A1P53007 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLC25A1P53007 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC25A1P53007 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC25A1P53007 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLC25A1P53007 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC25A1P53007 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.65■□□□□ 0.74
SLC25A1P53007 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLC25A1P53007 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLC25A1P53007 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.65■□□□□ 0.74
SLC25A1P53007 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC25A1P53007 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC25A1P53007 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLC25A1P53007 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC25A1P53007 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC25A1P53007 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
SLC25A1P53007 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.64■□□□□ 0.74
SLC25A1P53007 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SLC25A1P53007 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SLC25A1P53007 KRT125P-201ENST00000546827 989 ntBASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 171.1 ms