Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.29■□□□□ 0.84
HMGA2P52926 AL137060.1-201ENST00000618151 2648 ntBASIC20.28■□□□□ 0.84
HMGA2P52926 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HMGA2P52926 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.28■□□□□ 0.84
HMGA2P52926 LINC01529-204ENST00000636474 1715 ntBASIC20.28■□□□□ 0.84
HMGA2P52926 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HMGA2P52926 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
HMGA2P52926 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HMGA2P52926 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.28■□□□□ 0.84
HMGA2P52926 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.28■□□□□ 0.84
HMGA2P52926 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
HMGA2P52926 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.28■□□□□ 0.84
HMGA2P52926 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HMGA2P52926 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.27■□□□□ 0.84
HMGA2P52926 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HMGA2P52926 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HMGA2P52926 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
HMGA2P52926 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HMGA2P52926 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
HMGA2P52926 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.27■□□□□ 0.84
HMGA2P52926 AC004987.1-201ENST00000428627 508 ntBASIC20.27■□□□□ 0.84
HMGA2P52926 ATP5G2P3-201ENST00000429083 425 ntBASIC20.27■□□□□ 0.84
HMGA2P52926 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.27■□□□□ 0.84
HMGA2P52926 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HMGA2P52926 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HMGA2P52926 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HMGA2P52926 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HMGA2P52926 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HMGA2P52926 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HMGA2P52926 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
HMGA2P52926 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.26■□□□□ 0.83
HMGA2P52926 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HMGA2P52926 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HMGA2P52926 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.25■□□□□ 0.83
HMGA2P52926 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
HMGA2P52926 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HMGA2P52926 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.25■□□□□ 0.83
HMGA2P52926 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.25■□□□□ 0.83
HMGA2P52926 MIR4508-201ENST00000584178 70 ntBASIC20.25■□□□□ 0.83
HMGA2P52926 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HMGA2P52926 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
HMGA2P52926 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
HMGA2P52926 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HMGA2P52926 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
HMGA2P52926 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
HMGA2P52926 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.24■□□□□ 0.83
HMGA2P52926 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
HMGA2P52926 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HMGA2P52926 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.24■□□□□ 0.83
HMGA2P52926 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HMGA2P52926 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
HMGA2P52926 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
HMGA2P52926 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.24■□□□□ 0.83
HMGA2P52926 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
HMGA2P52926 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HMGA2P52926 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.23■□□□□ 0.83
HMGA2P52926 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.23■□□□□ 0.83
HMGA2P52926 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.23■□□□□ 0.83
HMGA2P52926 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HMGA2P52926 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HMGA2P52926 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HMGA2P52926 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.23■□□□□ 0.83
HMGA2P52926 AC010980.1-201ENST00000587192 1142 ntBASIC20.23■□□□□ 0.83
HMGA2P52926 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.23■□□□□ 0.83
HMGA2P52926 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HMGA2P52926 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HMGA2P52926 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HMGA2P52926 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HMGA2P52926 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.22■□□□□ 0.83
HMGA2P52926 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.22■□□□□ 0.83
HMGA2P52926 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HMGA2P52926 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HMGA2P52926 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HMGA2P52926 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HMGA2P52926 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HMGA2P52926 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.22■□□□□ 0.83
HMGA2P52926 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.22■□□□□ 0.83
HMGA2P52926 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.22■□□□□ 0.83
HMGA2P52926 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
HMGA2P52926 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.22■□□□□ 0.83
HMGA2P52926 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HMGA2P52926 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
HMGA2P52926 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HMGA2P52926 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
HMGA2P52926 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HMGA2P52926 AC026310.3-201ENST00000625186 2373 ntBASIC20.21■□□□□ 0.83
HMGA2P52926 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
HMGA2P52926 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.21■□□□□ 0.83
HMGA2P52926 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HMGA2P52926 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
HMGA2P52926 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
HMGA2P52926 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.2■□□□□ 0.82
HMGA2P52926 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.2■□□□□ 0.82
HMGA2P52926 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
HMGA2P52926 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HMGA2P52926 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
HMGA2P52926 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.2■□□□□ 0.82
HMGA2P52926 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.2■□□□□ 0.82
HMGA2P52926 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
HMGA2P52926 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms