Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMSP52788 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMSP52788 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SMSP52788 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
SMSP52788 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.62■□□□□ 0.89
SMSP52788 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMSP52788 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMSP52788 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMSP52788 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMSP52788 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMSP52788 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMSP52788 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMSP52788 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.62■□□□□ 0.89
SMSP52788 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
SMSP52788 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.62■□□□□ 0.89
SMSP52788 AC104564.3-201ENST00000582367 638 ntBASIC20.62■□□□□ 0.89
SMSP52788 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
SMSP52788 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
SMSP52788 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SMSP52788 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMSP52788 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMSP52788 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMSP52788 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMSP52788 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
SMSP52788 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.61■□□□□ 0.89
SMSP52788 EP400NL-214ENST00000641289 2402 ntBASIC20.61■□□□□ 0.89
SMSP52788 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SMSP52788 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.61■□□□□ 0.89
SMSP52788 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.61■□□□□ 0.89
SMSP52788 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.61■□□□□ 0.89
SMSP52788 AL031432.3-201ENST00000607698 485 ntBASIC20.61■□□□□ 0.89
SMSP52788 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMSP52788 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SMSP52788 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMSP52788 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMSP52788 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMSP52788 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMSP52788 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMSP52788 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.6■□□□□ 0.89
SMSP52788 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMSP52788 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SMSP52788 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.6■□□□□ 0.89
SMSP52788 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMSP52788 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.6■□□□□ 0.89
SMSP52788 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SMSP52788 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMSP52788 AC092171.4-201ENST00000609130 632 ntBASIC20.6■□□□□ 0.89
SMSP52788 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.6■□□□□ 0.89
SMSP52788 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMSP52788 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMSP52788 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMSP52788 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMSP52788 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMSP52788 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SMSP52788 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMSP52788 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.59■□□□□ 0.89
SMSP52788 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SMSP52788 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMSP52788 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMSP52788 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SMSP52788 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
SMSP52788 AC026271.2-201ENST00000428091 497 ntBASIC20.59■□□□□ 0.89
SMSP52788 AC004448.1-201ENST00000458332 883 ntBASIC20.59■□□□□ 0.89
SMSP52788 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.59■□□□□ 0.89
SMSP52788 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SMSP52788 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.59■□□□□ 0.89
SMSP52788 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SMSP52788 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.59■□□□□ 0.89
SMSP52788 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMSP52788 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SMSP52788 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMSP52788 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.58■□□□□ 0.89
SMSP52788 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
SMSP52788 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.58■□□□□ 0.89
SMSP52788 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
SMSP52788 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SMSP52788 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.88
SMSP52788 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SMSP52788 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SMSP52788 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SMSP52788 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
SMSP52788 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.58■□□□□ 0.88
SMSP52788 AC005703.6-201ENST00000623265 1329 ntBASIC20.57■□□□□ 0.88
SMSP52788 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMSP52788 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SMSP52788 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
SMSP52788 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMSP52788 AC105265.2-201ENST00000467189 838 ntBASIC20.57■□□□□ 0.88
SMSP52788 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.57■□□□□ 0.88
SMSP52788 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMSP52788 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SMSP52788 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMSP52788 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMSP52788 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.57■□□□□ 0.88
SMSP52788 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMSP52788 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMSP52788 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SMSP52788 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.56■□□□□ 0.88
SMSP52788 GUSBP5-202ENST00000510805 1989 ntBASIC20.56■□□□□ 0.88
SMSP52788 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms