Protein–RNA interactions for Protein: P51608

MECP2, Methyl-CpG-binding protein 2, humanhuman

Known RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2P51608 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
MECP2P51608 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
MECP2P51608 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
MECP2P51608 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MECP2P51608 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
MECP2P51608 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MECP2P51608 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
MECP2P51608 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
MECP2P51608 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.83■□□□□ 0.61
MECP2P51608 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
MECP2P51608 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC18.83■□□□□ 0.6
MECP2P51608 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
MECP2P51608 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.83■□□□□ 0.6
MECP2P51608 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MECP2P51608 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.83■□□□□ 0.6
MECP2P51608 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MECP2P51608 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
MECP2P51608 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MECP2P51608 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MECP2P51608 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MECP2P51608 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.82■□□□□ 0.6
MECP2P51608 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MECP2P51608 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MECP2P51608 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
MECP2P51608 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MECP2P51608 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MECP2P51608 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MECP2P51608 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.82■□□□□ 0.6
MECP2P51608 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MECP2P51608 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MECP2P51608 RARRES2P2-201ENST00000394842 485 ntBASIC18.82■□□□□ 0.6
MECP2P51608 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC18.82■□□□□ 0.6
MECP2P51608 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MECP2P51608 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.82■□□□□ 0.6
MECP2P51608 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MECP2P51608 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MECP2P51608 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MECP2P51608 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC18.82■□□□□ 0.6
MECP2P51608 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.82■□□□□ 0.6
MECP2P51608 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MECP2P51608 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MECP2P51608 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MECP2P51608 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MECP2P51608 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MECP2P51608 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC18.81■□□□□ 0.6
MECP2P51608 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
MECP2P51608 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.81■□□□□ 0.6
MECP2P51608 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MECP2P51608 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MECP2P51608 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
MECP2P51608 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
MECP2P51608 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MECP2P51608 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MECP2P51608 AC080038.3-201ENST00000623346 1952 ntBASIC18.81■□□□□ 0.6
MECP2P51608 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MECP2P51608 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
MECP2P51608 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC18.8■□□□□ 0.6
MECP2P51608 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.8■□□□□ 0.6
MECP2P51608 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.8■□□□□ 0.6
MECP2P51608 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
MECP2P51608 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.8■□□□□ 0.6
MECP2P51608 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
MECP2P51608 KRT18P10-201ENST00000388836 1287 ntBASIC18.8■□□□□ 0.6
MECP2P51608 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.8■□□□□ 0.6
MECP2P51608 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
MECP2P51608 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MECP2P51608 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MECP2P51608 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.8■□□□□ 0.6
MECP2P51608 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MECP2P51608 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
MECP2P51608 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
MECP2P51608 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MECP2P51608 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MECP2P51608 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
MECP2P51608 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MECP2P51608 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MECP2P51608 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MECP2P51608 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
MECP2P51608 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MECP2P51608 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
MECP2P51608 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MECP2P51608 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MECP2P51608 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MECP2P51608 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MECP2P51608 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MECP2P51608 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MECP2P51608 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MECP2P51608 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
MECP2P51608 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MECP2P51608 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
MECP2P51608 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
MECP2P51608 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MECP2P51608 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
MECP2P51608 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MECP2P51608 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
MECP2P51608 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
MECP2P51608 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.77■□□□□ 0.6
MECP2P51608 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MECP2P51608 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MECP2P51608 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms