Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC25.33■■□□□ 1.65
HTTP42858 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
HTTP42858 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC25.33■■□□□ 1.65
HTTP42858 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.64
HTTP42858 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC25.33■■□□□ 1.64
HTTP42858 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
HTTP42858 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
HTTP42858 AC083906.2-201ENST00000511578 360 ntBASIC25.32■■□□□ 1.64
HTTP42858 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC25.32■■□□□ 1.64
HTTP42858 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC25.32■■□□□ 1.64
HTTP42858 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
HTTP42858 OAS3-207ENST00000551007 998 ntTSL 2 BASIC25.32■■□□□ 1.64
HTTP42858 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
HTTP42858 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC25.32■■□□□ 1.64
HTTP42858 EI24-204ENST00000527235 1625 ntTSL 5 BASIC25.32■■□□□ 1.64
HTTP42858 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
HTTP42858 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
HTTP42858 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
HTTP42858 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
HTTP42858 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
HTTP42858 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC25.31■■□□□ 1.64
HTTP42858 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC25.31■■□□□ 1.64
HTTP42858 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
HTTP42858 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
HTTP42858 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
HTTP42858 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC25.31■■□□□ 1.64
HTTP42858 DUX4L4-201ENST00000566884 1269 ntBASIC25.31■■□□□ 1.64
HTTP42858 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC25.31■■□□□ 1.64
HTTP42858 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC25.31■■□□□ 1.64
HTTP42858 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
HTTP42858 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.31■■□□□ 1.64
HTTP42858 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC25.31■■□□□ 1.64
HTTP42858 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
HTTP42858 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
HTTP42858 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
HTTP42858 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
HTTP42858 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
HTTP42858 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
HTTP42858 TSPY6P-201ENST00000448518 926 ntBASIC25.3■■□□□ 1.64
HTTP42858 SPI1-203ENST00000533030 661 ntTSL 2 BASIC25.3■■□□□ 1.64
HTTP42858 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC25.3■■□□□ 1.64
HTTP42858 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC25.3■■□□□ 1.64
HTTP42858 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC25.3■■□□□ 1.64
HTTP42858 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
HTTP42858 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
HTTP42858 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
HTTP42858 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC25.29■■□□□ 1.64
HTTP42858 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
HTTP42858 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC25.29■■□□□ 1.64
HTTP42858 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
HTTP42858 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
HTTP42858 MFF-208ENST00000409616 1247 ntTSL 5 BASIC25.29■■□□□ 1.64
HTTP42858 KRT18P11-201ENST00000435214 1283 ntBASIC25.29■■□□□ 1.64
HTTP42858 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
HTTP42858 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
HTTP42858 AC092803.2-201ENST00000564287 1899 ntBASIC25.28■■□□□ 1.64
HTTP42858 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
HTTP42858 MAZ-216ENST00000616501 991 ntTSL 5 BASIC25.28■■□□□ 1.64
HTTP42858 PFKL-212ENST00000628044 129 ntTSL 3 BASIC25.28■■□□□ 1.64
HTTP42858 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
HTTP42858 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
HTTP42858 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC25.28■■□□□ 1.64
HTTP42858 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
HTTP42858 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
HTTP42858 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC25.28■■□□□ 1.64
HTTP42858 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
HTTP42858 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC25.27■■□□□ 1.64
HTTP42858 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
HTTP42858 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC25.27■■□□□ 1.64
HTTP42858 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC25.27■■□□□ 1.64
HTTP42858 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC25.27■■□□□ 1.64
HTTP42858 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC25.27■■□□□ 1.64
HTTP42858 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC25.26■■□□□ 1.63
HTTP42858 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC25.26■■□□□ 1.63
HTTP42858 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC25.26■■□□□ 1.63
HTTP42858 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC25.26■■□□□ 1.63
HTTP42858 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
HTTP42858 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
HTTP42858 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
HTTP42858 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
HTTP42858 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
HTTP42858 ALDH1A3-203ENST00000557963 1670 ntBASIC25.26■■□□□ 1.63
HTTP42858 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
HTTP42858 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
HTTP42858 LSR-205ENST00000427250 1606 ntTSL 2 BASIC25.25■■□□□ 1.63
HTTP42858 AC142086.6-201ENST00000621154 1765 ntBASIC25.25■■□□□ 1.63
HTTP42858 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC25.25■■□□□ 1.63
HTTP42858 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
HTTP42858 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
HTTP42858 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
HTTP42858 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC25.25■■□□□ 1.63
HTTP42858 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC25.25■■□□□ 1.63
HTTP42858 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
HTTP42858 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC25.24■■□□□ 1.63
HTTP42858 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC25.24■■□□□ 1.63
HTTP42858 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC25.24■■□□□ 1.63
HTTP42858 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
HTTP42858 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC25.24■■□□□ 1.63
HTTP42858 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC25.24■■□□□ 1.63
HTTP42858 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms