Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
GDNFP39905 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.22■□□□□ 0.67
GDNFP39905 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GDNFP39905 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
GDNFP39905 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GDNFP39905 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GDNFP39905 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GDNFP39905 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
GDNFP39905 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GDNFP39905 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GDNFP39905 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GDNFP39905 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.21■□□□□ 0.67
GDNFP39905 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
GDNFP39905 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.21■□□□□ 0.67
GDNFP39905 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GDNFP39905 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
GDNFP39905 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
GDNFP39905 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GDNFP39905 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.21■□□□□ 0.67
GDNFP39905 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GDNFP39905 AC019171.1-201ENST00000601251 1056 ntBASIC19.21■□□□□ 0.67
GDNFP39905 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.21■□□□□ 0.67
GDNFP39905 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
GDNFP39905 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GDNFP39905 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GDNFP39905 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.21■□□□□ 0.67
GDNFP39905 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GDNFP39905 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
GDNFP39905 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.2■□□□□ 0.66
GDNFP39905 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
GDNFP39905 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GDNFP39905 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.2■□□□□ 0.66
GDNFP39905 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GDNFP39905 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.2■□□□□ 0.66
GDNFP39905 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.2■□□□□ 0.66
GDNFP39905 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.2■□□□□ 0.66
GDNFP39905 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
GDNFP39905 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GDNFP39905 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.2■□□□□ 0.66
GDNFP39905 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GDNFP39905 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GDNFP39905 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
GDNFP39905 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GDNFP39905 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GDNFP39905 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GDNFP39905 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GDNFP39905 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.19■□□□□ 0.66
GDNFP39905 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GDNFP39905 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GDNFP39905 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
GDNFP39905 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
GDNFP39905 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GDNFP39905 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GDNFP39905 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GDNFP39905 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.18■□□□□ 0.66
GDNFP39905 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
GDNFP39905 AC090877.2-201ENST00000558441 1738 ntBASIC19.18■□□□□ 0.66
GDNFP39905 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GDNFP39905 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GDNFP39905 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.18■□□□□ 0.66
GDNFP39905 AC074183.2-201ENST00000623112 922 ntBASIC19.18■□□□□ 0.66
GDNFP39905 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
GDNFP39905 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
GDNFP39905 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GDNFP39905 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.18■□□□□ 0.66
GDNFP39905 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GDNFP39905 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GDNFP39905 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
GDNFP39905 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GDNFP39905 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
GDNFP39905 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.17■□□□□ 0.66
GDNFP39905 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
GDNFP39905 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.17■□□□□ 0.66
GDNFP39905 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
GDNFP39905 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GDNFP39905 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
GDNFP39905 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.17■□□□□ 0.66
GDNFP39905 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
GDNFP39905 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
GDNFP39905 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
GDNFP39905 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
GDNFP39905 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.16■□□□□ 0.66
GDNFP39905 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.16■□□□□ 0.66
GDNFP39905 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GDNFP39905 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
GDNFP39905 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.15■□□□□ 0.66
GDNFP39905 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
GDNFP39905 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GDNFP39905 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.15■□□□□ 0.66
GDNFP39905 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
GDNFP39905 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GDNFP39905 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
GDNFP39905 AC103834.1-201ENST00000520383 144 ntBASIC19.15■□□□□ 0.66
GDNFP39905 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.15■□□□□ 0.66
GDNFP39905 AC026310.3-201ENST00000625186 2373 ntBASIC19.15■□□□□ 0.66
GDNFP39905 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GDNFP39905 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
GDNFP39905 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
GDNFP39905 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
GDNFP39905 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms