Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.93■□□□□ 0.94
KRT20P35900 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT20P35900 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.93■□□□□ 0.94
KRT20P35900 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.93■□□□□ 0.94
KRT20P35900 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT20P35900 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT20P35900 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
KRT20P35900 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT20P35900 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
KRT20P35900 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.92■□□□□ 0.94
KRT20P35900 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT20P35900 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT20P35900 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT20P35900 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT20P35900 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT20P35900 DUSP8P3-201ENST00000399571 1760 ntBASIC20.92■□□□□ 0.94
KRT20P35900 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT20P35900 LINC00526-201ENST00000581067 1875 ntBASIC20.92■□□□□ 0.94
KRT20P35900 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT20P35900 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
KRT20P35900 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
KRT20P35900 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KRT20P35900 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
KRT20P35900 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KRT20P35900 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
KRT20P35900 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.91■□□□□ 0.94
KRT20P35900 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.91■□□□□ 0.94
KRT20P35900 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.91■□□□□ 0.94
KRT20P35900 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
KRT20P35900 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.91■□□□□ 0.94
KRT20P35900 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.91■□□□□ 0.94
KRT20P35900 AL356740.2-201ENST00000601559 647 ntBASIC20.91■□□□□ 0.94
KRT20P35900 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
KRT20P35900 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
KRT20P35900 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
KRT20P35900 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
KRT20P35900 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
KRT20P35900 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT20P35900 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT20P35900 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT20P35900 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT20P35900 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
KRT20P35900 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.89■□□□□ 0.94
KRT20P35900 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
KRT20P35900 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.89■□□□□ 0.94
KRT20P35900 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
KRT20P35900 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.89■□□□□ 0.94
KRT20P35900 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
KRT20P35900 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
KRT20P35900 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
KRT20P35900 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
KRT20P35900 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
KRT20P35900 GUSBP5-202ENST00000510805 1989 ntBASIC20.89■□□□□ 0.93
KRT20P35900 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
KRT20P35900 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
KRT20P35900 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.89■□□□□ 0.93
KRT20P35900 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KRT20P35900 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
KRT20P35900 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
KRT20P35900 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KRT20P35900 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
KRT20P35900 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
KRT20P35900 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
KRT20P35900 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
KRT20P35900 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
KRT20P35900 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
KRT20P35900 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KRT20P35900 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KRT20P35900 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KRT20P35900 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
KRT20P35900 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.88■□□□□ 0.93
KRT20P35900 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KRT20P35900 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KRT20P35900 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KRT20P35900 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.87■□□□□ 0.93
KRT20P35900 AC092068.2-201ENST00000590491 1708 ntBASIC20.87■□□□□ 0.93
KRT20P35900 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KRT20P35900 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.87■□□□□ 0.93
KRT20P35900 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KRT20P35900 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KRT20P35900 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.87■□□□□ 0.93
KRT20P35900 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KRT20P35900 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
KRT20P35900 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KRT20P35900 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KRT20P35900 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
KRT20P35900 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KRT20P35900 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KRT20P35900 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KRT20P35900 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KRT20P35900 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
KRT20P35900 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.86■□□□□ 0.93
KRT20P35900 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
KRT20P35900 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
KRT20P35900 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
KRT20P35900 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KRT20P35900 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
KRT20P35900 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KRT20P35900 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.85■□□□□ 0.93
KRT20P35900 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms