Protein–RNA interactions for Protein: P27449

ATP6V0C, V-type proton ATPase 16 kDa proteolipid subunit, humanhuman

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0CP27449 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
ATP6V0CP27449 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATP6V0CP27449 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.72■□□□□ 0.43
ATP6V0CP27449 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATP6V0CP27449 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ATP6V0CP27449 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATP6V0CP27449 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATP6V0CP27449 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATP6V0CP27449 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATP6V0CP27449 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.71■□□□□ 0.43
ATP6V0CP27449 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
ATP6V0CP27449 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ATP6V0CP27449 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC17.71■□□□□ 0.43
ATP6V0CP27449 AC092296.2-201ENST00000589470 999 ntBASIC17.71■□□□□ 0.43
ATP6V0CP27449 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATP6V0CP27449 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.71■□□□□ 0.43
ATP6V0CP27449 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
ATP6V0CP27449 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ATP6V0CP27449 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
ATP6V0CP27449 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
ATP6V0CP27449 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ATP6V0CP27449 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC17.7■□□□□ 0.42
ATP6V0CP27449 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ATP6V0CP27449 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP6V0CP27449 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
ATP6V0CP27449 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
ATP6V0CP27449 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
ATP6V0CP27449 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP6V0CP27449 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP6V0CP27449 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.7■□□□□ 0.42
ATP6V0CP27449 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
ATP6V0CP27449 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC17.7■□□□□ 0.42
ATP6V0CP27449 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC17.7■□□□□ 0.42
ATP6V0CP27449 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ATP6V0CP27449 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP6V0CP27449 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC17.7■□□□□ 0.42
ATP6V0CP27449 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.7■□□□□ 0.42
ATP6V0CP27449 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATP6V0CP27449 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
ATP6V0CP27449 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.69■□□□□ 0.42
ATP6V0CP27449 AC092667.1-201ENST00000434301 2586 ntBASIC17.69■□□□□ 0.42
ATP6V0CP27449 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP6V0CP27449 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP6V0CP27449 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
ATP6V0CP27449 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.69■□□□□ 0.42
ATP6V0CP27449 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP6V0CP27449 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP6V0CP27449 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP6V0CP27449 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC17.69■□□□□ 0.42
ATP6V0CP27449 AC087742.1-201ENST00000575880 1738 ntBASIC17.69■□□□□ 0.42
ATP6V0CP27449 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP6V0CP27449 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP6V0CP27449 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
ATP6V0CP27449 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ATP6V0CP27449 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP6V0CP27449 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC17.68■□□□□ 0.42
ATP6V0CP27449 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
ATP6V0CP27449 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP6V0CP27449 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC17.68■□□□□ 0.42
ATP6V0CP27449 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
ATP6V0CP27449 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ATP6V0CP27449 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP6V0CP27449 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP6V0CP27449 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC17.67■□□□□ 0.42
ATP6V0CP27449 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
ATP6V0CP27449 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
ATP6V0CP27449 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC17.67■□□□□ 0.42
ATP6V0CP27449 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC17.67■□□□□ 0.42
ATP6V0CP27449 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATP6V0CP27449 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATP6V0CP27449 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATP6V0CP27449 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATP6V0CP27449 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ATP6V0CP27449 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.67■□□□□ 0.42
ATP6V0CP27449 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATP6V0CP27449 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATP6V0CP27449 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ATP6V0CP27449 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATP6V0CP27449 SSSCA1-AS1-201ENST00000567594 614 ntBASIC17.66■□□□□ 0.42
ATP6V0CP27449 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATP6V0CP27449 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATP6V0CP27449 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.66■□□□□ 0.42
ATP6V0CP27449 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.66■□□□□ 0.42
ATP6V0CP27449 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATP6V0CP27449 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATP6V0CP27449 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATP6V0CP27449 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATP6V0CP27449 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATP6V0CP27449 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.65■□□□□ 0.42
ATP6V0CP27449 AL353803.4-201ENST00000565882 1934 ntBASIC17.65■□□□□ 0.42
ATP6V0CP27449 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.65■□□□□ 0.42
ATP6V0CP27449 ECEL1P2-201ENST00000461596 1295 ntBASIC17.65■□□□□ 0.42
ATP6V0CP27449 METRNL-202ENST00000570778 967 ntTSL 5 BASIC17.65■□□□□ 0.42
ATP6V0CP27449 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATP6V0CP27449 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.65■□□□□ 0.42
ATP6V0CP27449 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATP6V0CP27449 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ATP6V0CP27449 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATP6V0CP27449 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ATP6V0CP27449 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms