Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23.37■■□□□ 1.33
MMP8P22894 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.37■■□□□ 1.33
MMP8P22894 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
MMP8P22894 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
MMP8P22894 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
MMP8P22894 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
MMP8P22894 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
MMP8P22894 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.37■■□□□ 1.33
MMP8P22894 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC23.37■■□□□ 1.33
MMP8P22894 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
MMP8P22894 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
MMP8P22894 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
MMP8P22894 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
MMP8P22894 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.36■■□□□ 1.33
MMP8P22894 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
MMP8P22894 AL117328.2-201ENST00000624617 1940 ntBASIC23.36■■□□□ 1.33
MMP8P22894 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
MMP8P22894 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
MMP8P22894 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.36■■□□□ 1.33
MMP8P22894 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.36■■□□□ 1.33
MMP8P22894 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
MMP8P22894 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
MMP8P22894 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
MMP8P22894 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
MMP8P22894 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
MMP8P22894 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
MMP8P22894 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
MMP8P22894 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
MMP8P22894 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.35■■□□□ 1.33
MMP8P22894 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
MMP8P22894 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
MMP8P22894 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
MMP8P22894 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
MMP8P22894 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.35■■□□□ 1.33
MMP8P22894 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
MMP8P22894 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.35■■□□□ 1.33
MMP8P22894 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
MMP8P22894 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.35■■□□□ 1.33
MMP8P22894 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
MMP8P22894 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.35■■□□□ 1.33
MMP8P22894 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
MMP8P22894 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
MMP8P22894 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.34■■□□□ 1.33
MMP8P22894 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
MMP8P22894 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
MMP8P22894 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
MMP8P22894 AC006455.2-201ENST00000429931 906 ntBASIC23.34■■□□□ 1.33
MMP8P22894 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC23.34■■□□□ 1.33
MMP8P22894 AC099791.2-201ENST00000605725 427 ntBASIC23.34■■□□□ 1.33
MMP8P22894 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
MMP8P22894 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
MMP8P22894 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.34■■□□□ 1.33
MMP8P22894 AC004687.1-201ENST00000579003 1625 ntBASIC23.33■■□□□ 1.33
MMP8P22894 AC087742.1-201ENST00000575880 1738 ntBASIC23.33■■□□□ 1.33
MMP8P22894 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
MMP8P22894 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
MMP8P22894 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
MMP8P22894 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
MMP8P22894 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
MMP8P22894 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.33■■□□□ 1.33
MMP8P22894 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
MMP8P22894 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
MMP8P22894 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.33■■□□□ 1.33
MMP8P22894 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
MMP8P22894 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
MMP8P22894 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
MMP8P22894 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
MMP8P22894 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.32
MMP8P22894 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
MMP8P22894 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.33■■□□□ 1.32
MMP8P22894 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
MMP8P22894 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.32
MMP8P22894 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC23.32■■□□□ 1.32
MMP8P22894 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
MMP8P22894 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC23.32■■□□□ 1.32
MMP8P22894 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
MMP8P22894 SRD5A1P1-201ENST00000442297 786 ntBASIC23.32■■□□□ 1.32
MMP8P22894 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.32■■□□□ 1.32
MMP8P22894 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
MMP8P22894 GUSBP5-202ENST00000510805 1989 ntBASIC23.32■■□□□ 1.32
MMP8P22894 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
MMP8P22894 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC23.32■■□□□ 1.32
MMP8P22894 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
MMP8P22894 AC127496.7-201ENST00000625110 1798 ntBASIC23.32■■□□□ 1.32
MMP8P22894 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.32■■□□□ 1.32
MMP8P22894 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
MMP8P22894 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
MMP8P22894 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.31■■□□□ 1.32
MMP8P22894 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
MMP8P22894 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.31■■□□□ 1.32
MMP8P22894 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.31■■□□□ 1.32
MMP8P22894 MIR4466-201ENST00000606121 54 ntBASIC23.31■■□□□ 1.32
MMP8P22894 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
MMP8P22894 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
MMP8P22894 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
MMP8P22894 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC23.31■■□□□ 1.32
MMP8P22894 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
MMP8P22894 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.31■■□□□ 1.32
MMP8P22894 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
MMP8P22894 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms