Protein–RNA interactions for Protein: P17980

PSMC3, 26S proteasome regulatory subunit 6A, humanhuman

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3P17980 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PSMC3P17980 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PSMC3P17980 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
PSMC3P17980 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PSMC3P17980 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.09■■□□□ 1.29
PSMC3P17980 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PSMC3P17980 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC23.08■■□□□ 1.29
PSMC3P17980 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PSMC3P17980 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PSMC3P17980 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PSMC3P17980 DUX4L4-201ENST00000566884 1269 ntBASIC23.08■■□□□ 1.29
PSMC3P17980 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.28
PSMC3P17980 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
PSMC3P17980 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.07■■□□□ 1.28
PSMC3P17980 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC23.07■■□□□ 1.28
PSMC3P17980 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC23.07■■□□□ 1.28
PSMC3P17980 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC23.07■■□□□ 1.28
PSMC3P17980 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PSMC3P17980 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
PSMC3P17980 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PSMC3P17980 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
PSMC3P17980 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.06■■□□□ 1.28
PSMC3P17980 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PSMC3P17980 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PSMC3P17980 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PSMC3P17980 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
PSMC3P17980 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
PSMC3P17980 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PSMC3P17980 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PSMC3P17980 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PSMC3P17980 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PSMC3P17980 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC23.05■■□□□ 1.28
PSMC3P17980 LHPP-203ENST00000392757 840 ntTSL 3 BASIC23.05■■□□□ 1.28
PSMC3P17980 GXYLT1P2-201ENST00000433312 1230 ntBASIC23.05■■□□□ 1.28
PSMC3P17980 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC23.05■■□□□ 1.28
PSMC3P17980 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC23.05■■□□□ 1.28
PSMC3P17980 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
PSMC3P17980 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC23.05■■□□□ 1.28
PSMC3P17980 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
PSMC3P17980 LINC02228-203ENST00000641970 1355 ntBASIC23.04■■□□□ 1.28
PSMC3P17980 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PSMC3P17980 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.04■■□□□ 1.28
PSMC3P17980 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PSMC3P17980 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PSMC3P17980 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.04■■□□□ 1.28
PSMC3P17980 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC23.04■■□□□ 1.28
PSMC3P17980 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
PSMC3P17980 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
PSMC3P17980 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC23.04■■□□□ 1.28
PSMC3P17980 KRT18P14-201ENST00000534205 1250 ntBASIC23.04■■□□□ 1.28
PSMC3P17980 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PSMC3P17980 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
PSMC3P17980 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PSMC3P17980 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
PSMC3P17980 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PSMC3P17980 AC133561.1-201ENST00000568600 2415 ntBASIC23.03■■□□□ 1.28
PSMC3P17980 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
PSMC3P17980 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
PSMC3P17980 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.03■■□□□ 1.28
PSMC3P17980 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PSMC3P17980 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PSMC3P17980 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PSMC3P17980 AC004911.1-201ENST00000416316 871 ntBASIC23.03■■□□□ 1.28
PSMC3P17980 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC23.03■■□□□ 1.28
PSMC3P17980 AP005435.1-201ENST00000529293 1178 ntBASIC23.03■■□□□ 1.28
PSMC3P17980 TERF1P2-201ENST00000583350 1212 ntBASIC23.03■■□□□ 1.28
PSMC3P17980 NTF6G-201ENST00000591094 616 ntBASIC23.03■■□□□ 1.28
PSMC3P17980 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PSMC3P17980 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC23.03■■□□□ 1.28
PSMC3P17980 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC23.03■■□□□ 1.28
PSMC3P17980 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.03■■□□□ 1.28
PSMC3P17980 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PSMC3P17980 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PSMC3P17980 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PSMC3P17980 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
PSMC3P17980 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.02■■□□□ 1.28
PSMC3P17980 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
PSMC3P17980 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PSMC3P17980 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
PSMC3P17980 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PSMC3P17980 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PSMC3P17980 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC23.02■■□□□ 1.28
PSMC3P17980 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.02■■□□□ 1.28
PSMC3P17980 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.02■■□□□ 1.28
PSMC3P17980 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PSMC3P17980 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PSMC3P17980 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.01■■□□□ 1.27
PSMC3P17980 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PSMC3P17980 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
PSMC3P17980 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PSMC3P17980 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
PSMC3P17980 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PSMC3P17980 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
PSMC3P17980 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC23.01■■□□□ 1.27
PSMC3P17980 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PSMC3P17980 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PSMC3P17980 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PSMC3P17980 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23■■□□□ 1.27
PSMC3P17980 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23■■□□□ 1.27
PSMC3P17980 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms