Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAB40ALP0C0E4 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
RAB40ALP0C0E4 AC027612.3-201ENST00000413684 1047 ntBASIC20.9■□□□□ 0.94
RAB40ALP0C0E4 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.9■□□□□ 0.94
RAB40ALP0C0E4 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.9■□□□□ 0.94
RAB40ALP0C0E4 AP005435.1-201ENST00000529293 1178 ntBASIC20.9■□□□□ 0.94
RAB40ALP0C0E4 AL354811.1-201ENST00000610286 706 ntBASIC20.9■□□□□ 0.94
RAB40ALP0C0E4 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.9■□□□□ 0.94
RAB40ALP0C0E4 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.9■□□□□ 0.94
RAB40ALP0C0E4 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RAB40ALP0C0E4 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAB40ALP0C0E4 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RAB40ALP0C0E4 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
RAB40ALP0C0E4 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.89■□□□□ 0.94
RAB40ALP0C0E4 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.89■□□□□ 0.94
RAB40ALP0C0E4 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
RAB40ALP0C0E4 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RAB40ALP0C0E4 AC123595.1-201ENST00000440769 1046 ntBASIC20.89■□□□□ 0.93
RAB40ALP0C0E4 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.89■□□□□ 0.93
RAB40ALP0C0E4 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.89■□□□□ 0.93
RAB40ALP0C0E4 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.89■□□□□ 0.93
RAB40ALP0C0E4 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RAB40ALP0C0E4 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAB40ALP0C0E4 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RAB40ALP0C0E4 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAB40ALP0C0E4 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAB40ALP0C0E4 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RAB40ALP0C0E4 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAB40ALP0C0E4 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.88■□□□□ 0.93
RAB40ALP0C0E4 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.88■□□□□ 0.93
RAB40ALP0C0E4 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RAB40ALP0C0E4 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RAB40ALP0C0E4 AC010525.1-201ENST00000585559 441 ntBASIC20.88■□□□□ 0.93
RAB40ALP0C0E4 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
RAB40ALP0C0E4 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RAB40ALP0C0E4 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.88■□□□□ 0.93
RAB40ALP0C0E4 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAB40ALP0C0E4 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAB40ALP0C0E4 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAB40ALP0C0E4 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
RAB40ALP0C0E4 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAB40ALP0C0E4 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.87■□□□□ 0.93
RAB40ALP0C0E4 AC012414.1-201ENST00000556676 535 ntBASIC20.87■□□□□ 0.93
RAB40ALP0C0E4 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAB40ALP0C0E4 LINC00543-201ENST00000567234 1845 ntBASIC20.87■□□□□ 0.93
RAB40ALP0C0E4 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RAB40ALP0C0E4 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
RAB40ALP0C0E4 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.86■□□□□ 0.93
RAB40ALP0C0E4 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RAB40ALP0C0E4 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
RAB40ALP0C0E4 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RAB40ALP0C0E4 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
RAB40ALP0C0E4 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAB40ALP0C0E4 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.85■□□□□ 0.93
RAB40ALP0C0E4 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.85■□□□□ 0.93
RAB40ALP0C0E4 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RAB40ALP0C0E4 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RAB40ALP0C0E4 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAB40ALP0C0E4 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RAB40ALP0C0E4 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.85■□□□□ 0.93
RAB40ALP0C0E4 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAB40ALP0C0E4 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.85■□□□□ 0.93
RAB40ALP0C0E4 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.85■□□□□ 0.93
RAB40ALP0C0E4 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.85■□□□□ 0.93
RAB40ALP0C0E4 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAB40ALP0C0E4 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.84■□□□□ 0.93
RAB40ALP0C0E4 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAB40ALP0C0E4 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.84■□□□□ 0.93
RAB40ALP0C0E4 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAB40ALP0C0E4 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.84■□□□□ 0.93
RAB40ALP0C0E4 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.84■□□□□ 0.93
RAB40ALP0C0E4 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RAB40ALP0C0E4 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.84■□□□□ 0.93
RAB40ALP0C0E4 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAB40ALP0C0E4 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RAB40ALP0C0E4 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAB40ALP0C0E4 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.83■□□□□ 0.93
RAB40ALP0C0E4 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.83■□□□□ 0.93
RAB40ALP0C0E4 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.83■□□□□ 0.93
RAB40ALP0C0E4 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
RAB40ALP0C0E4 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RAB40ALP0C0E4 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.83■□□□□ 0.93
RAB40ALP0C0E4 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
RAB40ALP0C0E4 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.83■□□□□ 0.92
RAB40ALP0C0E4 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
RAB40ALP0C0E4 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
RAB40ALP0C0E4 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RAB40ALP0C0E4 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAB40ALP0C0E4 AC012676.1-201ENST00000574705 1949 ntBASIC20.82■□□□□ 0.92
RAB40ALP0C0E4 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RAB40ALP0C0E4 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RAB40ALP0C0E4 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
RAB40ALP0C0E4 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAB40ALP0C0E4 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.82■□□□□ 0.92
RAB40ALP0C0E4 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAB40ALP0C0E4 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.82■□□□□ 0.92
RAB40ALP0C0E4 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.82■□□□□ 0.92
RAB40ALP0C0E4 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.82■□□□□ 0.92
RAB40ALP0C0E4 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB40ALP0C0E4 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 638 ms