Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
HTR1AP08908 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HTR1AP08908 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HTR1AP08908 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HTR1AP08908 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HTR1AP08908 AC010542.4-201ENST00000563151 1910 ntBASIC20.21■□□□□ 0.83
HTR1AP08908 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HTR1AP08908 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HTR1AP08908 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HTR1AP08908 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HTR1AP08908 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.21■□□□□ 0.83
HTR1AP08908 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HTR1AP08908 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HTR1AP08908 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.21■□□□□ 0.83
HTR1AP08908 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HTR1AP08908 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
HTR1AP08908 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HTR1AP08908 AC133552.2-201ENST00000619106 1032 ntBASIC20.21■□□□□ 0.83
HTR1AP08908 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HTR1AP08908 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HTR1AP08908 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HTR1AP08908 AC009831.1-201ENST00000580420 1582 ntBASIC20.21■□□□□ 0.83
HTR1AP08908 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HTR1AP08908 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
HTR1AP08908 ALDH1A3-203ENST00000557963 1670 ntBASIC20.2■□□□□ 0.82
HTR1AP08908 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.2■□□□□ 0.82
HTR1AP08908 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HTR1AP08908 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HTR1AP08908 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.2■□□□□ 0.82
HTR1AP08908 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.2■□□□□ 0.82
HTR1AP08908 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HTR1AP08908 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HTR1AP08908 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HTR1AP08908 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HTR1AP08908 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HTR1AP08908 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HTR1AP08908 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.19■□□□□ 0.82
HTR1AP08908 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HTR1AP08908 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HTR1AP08908 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HTR1AP08908 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HTR1AP08908 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HTR1AP08908 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.19■□□□□ 0.82
HTR1AP08908 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HTR1AP08908 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HTR1AP08908 AC087742.1-201ENST00000575880 1738 ntBASIC20.19■□□□□ 0.82
HTR1AP08908 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HTR1AP08908 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HTR1AP08908 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.18■□□□□ 0.82
HTR1AP08908 RPS2P7-201ENST00000447334 885 ntBASIC20.18■□□□□ 0.82
HTR1AP08908 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
HTR1AP08908 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.18■□□□□ 0.82
HTR1AP08908 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HTR1AP08908 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HTR1AP08908 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.17■□□□□ 0.82
HTR1AP08908 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.17■□□□□ 0.82
HTR1AP08908 AL022069.1-201ENST00000568025 1636 ntBASIC20.17■□□□□ 0.82
HTR1AP08908 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
HTR1AP08908 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HTR1AP08908 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
HTR1AP08908 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HTR1AP08908 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HTR1AP08908 AC092667.1-201ENST00000434301 2586 ntBASIC20.17■□□□□ 0.82
HTR1AP08908 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HTR1AP08908 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
HTR1AP08908 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HTR1AP08908 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HTR1AP08908 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
HTR1AP08908 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
HTR1AP08908 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.16■□□□□ 0.82
HTR1AP08908 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HTR1AP08908 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HTR1AP08908 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.16■□□□□ 0.82
HTR1AP08908 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.16■□□□□ 0.82
HTR1AP08908 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HTR1AP08908 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
HTR1AP08908 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HTR1AP08908 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
HTR1AP08908 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.15■□□□□ 0.82
HTR1AP08908 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
HTR1AP08908 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HTR1AP08908 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
HTR1AP08908 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HTR1AP08908 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HTR1AP08908 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
HTR1AP08908 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
HTR1AP08908 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HTR1AP08908 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
HTR1AP08908 AC018755.3-202ENST00000596210 929 ntBASIC20.14■□□□□ 0.81
HTR1AP08908 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
HTR1AP08908 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HTR1AP08908 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
HTR1AP08908 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.14■□□□□ 0.81
HTR1AP08908 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HTR1AP08908 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
HTR1AP08908 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
HTR1AP08908 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.13■□□□□ 0.81
HTR1AP08908 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
HTR1AP08908 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
HTR1AP08908 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms