Protein–RNA interactions for Protein: P05556

ITGB1, Integrin beta-1, humanhuman

Predictions only

Length 798 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1P05556 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
ITGB1P05556 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.96■■□□□ 1.43
ITGB1P05556 LINC02228-203ENST00000641970 1355 ntBASIC23.95■■□□□ 1.42
ITGB1P05556 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
ITGB1P05556 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
ITGB1P05556 DUX4L4-201ENST00000566884 1269 ntBASIC23.95■■□□□ 1.42
ITGB1P05556 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
ITGB1P05556 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.95■■□□□ 1.42
ITGB1P05556 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC23.95■■□□□ 1.42
ITGB1P05556 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
ITGB1P05556 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
ITGB1P05556 AC144652.1-201ENST00000609974 1624 ntBASIC23.95■■□□□ 1.42
ITGB1P05556 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
ITGB1P05556 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC23.94■■□□□ 1.42
ITGB1P05556 FP325331.1-202ENST00000623531 1380 ntBASIC23.94■■□□□ 1.42
ITGB1P05556 ME3-201ENST00000323418 1068 ntTSL 5 BASIC23.94■■□□□ 1.42
ITGB1P05556 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
ITGB1P05556 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.94■■□□□ 1.42
ITGB1P05556 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
ITGB1P05556 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
ITGB1P05556 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.93■■□□□ 1.42
ITGB1P05556 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC23.93■■□□□ 1.42
ITGB1P05556 OR2I1P-207ENST00000453522 948 ntBASIC23.93■■□□□ 1.42
ITGB1P05556 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC23.93■■□□□ 1.42
ITGB1P05556 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.93■■□□□ 1.42
ITGB1P05556 ABCB10P4-201ENST00000566803 2184 ntBASIC23.93■■□□□ 1.42
ITGB1P05556 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
ITGB1P05556 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.93■■□□□ 1.42
ITGB1P05556 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
ITGB1P05556 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.92■■□□□ 1.42
ITGB1P05556 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.92■■□□□ 1.42
ITGB1P05556 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.92■■□□□ 1.42
ITGB1P05556 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
ITGB1P05556 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.92■■□□□ 1.42
ITGB1P05556 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
ITGB1P05556 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
ITGB1P05556 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
ITGB1P05556 DENND3-207ENST00000518347 850 ntTSL 2 BASIC23.92■■□□□ 1.42
ITGB1P05556 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC23.92■■□□□ 1.42
ITGB1P05556 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.92■■□□□ 1.42
ITGB1P05556 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.92■■□□□ 1.42
ITGB1P05556 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
ITGB1P05556 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
ITGB1P05556 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC23.92■■□□□ 1.42
ITGB1P05556 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
ITGB1P05556 LHPP-203ENST00000392757 840 ntTSL 3 BASIC23.91■■□□□ 1.42
ITGB1P05556 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC23.91■■□□□ 1.42
ITGB1P05556 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
ITGB1P05556 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC23.91■■□□□ 1.42
ITGB1P05556 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
ITGB1P05556 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
ITGB1P05556 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
ITGB1P05556 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
ITGB1P05556 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
ITGB1P05556 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.9■■□□□ 1.42
ITGB1P05556 LINC01529-204ENST00000636474 1715 ntBASIC23.9■■□□□ 1.42
ITGB1P05556 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
ITGB1P05556 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
ITGB1P05556 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC23.9■■□□□ 1.42
ITGB1P05556 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC23.9■■□□□ 1.42
ITGB1P05556 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
ITGB1P05556 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
ITGB1P05556 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
ITGB1P05556 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
ITGB1P05556 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
ITGB1P05556 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
ITGB1P05556 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
ITGB1P05556 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.89■■□□□ 1.42
ITGB1P05556 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
ITGB1P05556 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
ITGB1P05556 NT5C3AP1-201ENST00000394500 1012 ntBASIC23.89■■□□□ 1.41
ITGB1P05556 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC23.89■■□□□ 1.41
ITGB1P05556 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
ITGB1P05556 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC23.89■■□□□ 1.41
ITGB1P05556 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
ITGB1P05556 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
ITGB1P05556 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
ITGB1P05556 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.89■■□□□ 1.41
ITGB1P05556 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
ITGB1P05556 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
ITGB1P05556 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
ITGB1P05556 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
ITGB1P05556 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
ITGB1P05556 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
ITGB1P05556 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC23.88■■□□□ 1.41
ITGB1P05556 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
ITGB1P05556 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
ITGB1P05556 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC23.88■■□□□ 1.41
ITGB1P05556 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC23.88■■□□□ 1.41
ITGB1P05556 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC23.88■■□□□ 1.41
ITGB1P05556 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.88■■□□□ 1.41
ITGB1P05556 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
ITGB1P05556 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
ITGB1P05556 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.87■■□□□ 1.41
ITGB1P05556 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
ITGB1P05556 MPST-204ENST00000404393 1329 ntTSL 5 BASIC23.87■■□□□ 1.41
ITGB1P05556 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
ITGB1P05556 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC23.87■■□□□ 1.41
ITGB1P05556 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
ITGB1P05556 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC23.87■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms