Protein–RNA interactions for Protein: P04637

TP53, Cellular tumor antigen p53, humanhuman

Predicted RBP Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP53P04637 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TP53P04637 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TP53P04637 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TP53P04637 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TP53P04637 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TP53P04637 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.29■□□□□ 0.84
TP53P04637 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TP53P04637 MIR4281-201ENST00000580852 62 ntBASIC20.29■□□□□ 0.84
TP53P04637 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
TP53P04637 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TP53P04637 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
TP53P04637 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TP53P04637 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
TP53P04637 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
TP53P04637 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TP53P04637 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TP53P04637 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.28■□□□□ 0.84
TP53P04637 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TP53P04637 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.28■□□□□ 0.84
TP53P04637 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.28■□□□□ 0.84
TP53P04637 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.28■□□□□ 0.84
TP53P04637 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
TP53P04637 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
TP53P04637 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TP53P04637 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TP53P04637 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.28■□□□□ 0.84
TP53P04637 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.27■□□□□ 0.84
TP53P04637 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TP53P04637 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
TP53P04637 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TP53P04637 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
TP53P04637 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TP53P04637 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TP53P04637 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TP53P04637 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TP53P04637 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.27■□□□□ 0.84
TP53P04637 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
TP53P04637 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.27■□□□□ 0.84
TP53P04637 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TP53P04637 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
TP53P04637 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TP53P04637 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
TP53P04637 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.26■□□□□ 0.83
TP53P04637 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TP53P04637 KRT18P24-201ENST00000344739 1156 ntBASIC20.26■□□□□ 0.83
TP53P04637 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TP53P04637 AC080038.3-201ENST00000623346 1952 ntBASIC20.26■□□□□ 0.83
TP53P04637 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.26■□□□□ 0.83
TP53P04637 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
TP53P04637 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TP53P04637 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
TP53P04637 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
TP53P04637 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TP53P04637 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TP53P04637 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TP53P04637 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TP53P04637 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TP53P04637 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TP53P04637 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TP53P04637 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.25■□□□□ 0.83
TP53P04637 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.25■□□□□ 0.83
TP53P04637 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.24■□□□□ 0.83
TP53P04637 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
TP53P04637 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TP53P04637 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TP53P04637 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.24■□□□□ 0.83
TP53P04637 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.24■□□□□ 0.83
TP53P04637 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.24■□□□□ 0.83
TP53P04637 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
TP53P04637 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.24■□□□□ 0.83
TP53P04637 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.24■□□□□ 0.83
TP53P04637 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.24■□□□□ 0.83
TP53P04637 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TP53P04637 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TP53P04637 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TP53P04637 AC087742.1-201ENST00000575880 1738 ntBASIC20.24■□□□□ 0.83
TP53P04637 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.24■□□□□ 0.83
TP53P04637 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
TP53P04637 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TP53P04637 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
TP53P04637 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.23■□□□□ 0.83
TP53P04637 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.23■□□□□ 0.83
TP53P04637 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TP53P04637 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.23■□□□□ 0.83
TP53P04637 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TP53P04637 BX664725.1-201ENST00000438252 379 ntBASIC20.23■□□□□ 0.83
TP53P04637 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
TP53P04637 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TP53P04637 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
TP53P04637 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.23■□□□□ 0.83
TP53P04637 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TP53P04637 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TP53P04637 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
TP53P04637 AC092053.2-201ENST00000640557 1818 ntBASIC20.23■□□□□ 0.83
TP53P04637 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TP53P04637 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.22■□□□□ 0.83
TP53P04637 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TP53P04637 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
TP53P04637 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TP53P04637 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms