Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.66■□□□□ 0.9
PDGFAP04085 AC141586.4-201ENST00000624558 1573 ntBASIC20.66■□□□□ 0.9
PDGFAP04085 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
PDGFAP04085 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
PDGFAP04085 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
PDGFAP04085 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDGFAP04085 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDGFAP04085 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDGFAP04085 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDGFAP04085 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.65■□□□□ 0.9
PDGFAP04085 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.65■□□□□ 0.9
PDGFAP04085 AC068473.5-201ENST00000616428 2072 ntBASIC20.65■□□□□ 0.9
PDGFAP04085 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.64■□□□□ 0.9
PDGFAP04085 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
PDGFAP04085 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
PDGFAP04085 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
PDGFAP04085 ALDH1A3-203ENST00000557963 1670 ntBASIC20.64■□□□□ 0.9
PDGFAP04085 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDGFAP04085 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.64■□□□□ 0.89
PDGFAP04085 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.64■□□□□ 0.89
PDGFAP04085 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.64■□□□□ 0.89
PDGFAP04085 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.64■□□□□ 0.89
PDGFAP04085 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDGFAP04085 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDGFAP04085 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDGFAP04085 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDGFAP04085 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.64■□□□□ 0.89
PDGFAP04085 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDGFAP04085 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDGFAP04085 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDGFAP04085 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PDGFAP04085 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PDGFAP04085 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PDGFAP04085 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PDGFAP04085 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDGFAP04085 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDGFAP04085 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDGFAP04085 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDGFAP04085 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.63■□□□□ 0.89
PDGFAP04085 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.63■□□□□ 0.89
PDGFAP04085 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDGFAP04085 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDGFAP04085 AL161729.1-201ENST00000604104 1402 ntBASIC20.62■□□□□ 0.89
PDGFAP04085 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDGFAP04085 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDGFAP04085 ID1-201ENST00000376105 1233 ntBASIC20.62■□□□□ 0.89
PDGFAP04085 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.62■□□□□ 0.89
PDGFAP04085 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PDGFAP04085 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.62■□□□□ 0.89
PDGFAP04085 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.62■□□□□ 0.89
PDGFAP04085 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.62■□□□□ 0.89
PDGFAP04085 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.62■□□□□ 0.89
PDGFAP04085 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.62■□□□□ 0.89
PDGFAP04085 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDGFAP04085 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDGFAP04085 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
PDGFAP04085 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.61■□□□□ 0.89
PDGFAP04085 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDGFAP04085 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDGFAP04085 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDGFAP04085 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
PDGFAP04085 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDGFAP04085 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PDGFAP04085 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
PDGFAP04085 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDGFAP04085 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDGFAP04085 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.61■□□□□ 0.89
PDGFAP04085 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.61■□□□□ 0.89
PDGFAP04085 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.61■□□□□ 0.89
PDGFAP04085 AC010525.1-201ENST00000585559 441 ntBASIC20.61■□□□□ 0.89
PDGFAP04085 NTF6G-201ENST00000591094 616 ntBASIC20.61■□□□□ 0.89
PDGFAP04085 AL354811.1-201ENST00000610286 706 ntBASIC20.61■□□□□ 0.89
PDGFAP04085 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.61■□□□□ 0.89
PDGFAP04085 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDGFAP04085 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PDGFAP04085 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDGFAP04085 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.6■□□□□ 0.89
PDGFAP04085 AC133637.1-201ENST00000624115 1537 ntBASIC20.6■□□□□ 0.89
PDGFAP04085 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.6■□□□□ 0.89
PDGFAP04085 KRT18P14-201ENST00000534205 1250 ntBASIC20.6■□□□□ 0.89
PDGFAP04085 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.6■□□□□ 0.89
PDGFAP04085 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.6■□□□□ 0.89
PDGFAP04085 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
PDGFAP04085 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
PDGFAP04085 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDGFAP04085 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.6■□□□□ 0.89
PDGFAP04085 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PDGFAP04085 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PDGFAP04085 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.59■□□□□ 0.89
PDGFAP04085 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.59■□□□□ 0.89
PDGFAP04085 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.59■□□□□ 0.89
PDGFAP04085 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
PDGFAP04085 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDGFAP04085 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.59■□□□□ 0.89
PDGFAP04085 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
PDGFAP04085 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDGFAP04085 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDGFAP04085 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDGFAP04085 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.59■□□□□ 0.89
PDGFAP04085 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms