Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
OPN1SWP03999 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.66■□□□□ 0.9
OPN1SWP03999 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.66■□□□□ 0.9
OPN1SWP03999 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.66■□□□□ 0.9
OPN1SWP03999 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.66■□□□□ 0.9
OPN1SWP03999 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
OPN1SWP03999 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
OPN1SWP03999 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
OPN1SWP03999 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
OPN1SWP03999 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
OPN1SWP03999 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.66■□□□□ 0.9
OPN1SWP03999 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
OPN1SWP03999 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
OPN1SWP03999 AC139530.1-201ENST00000575312 1977 ntBASIC20.65■□□□□ 0.9
OPN1SWP03999 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
OPN1SWP03999 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
OPN1SWP03999 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
OPN1SWP03999 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
OPN1SWP03999 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
OPN1SWP03999 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
OPN1SWP03999 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
OPN1SWP03999 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.65■□□□□ 0.9
OPN1SWP03999 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.65■□□□□ 0.9
OPN1SWP03999 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.65■□□□□ 0.9
OPN1SWP03999 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
OPN1SWP03999 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
OPN1SWP03999 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
OPN1SWP03999 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
OPN1SWP03999 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
OPN1SWP03999 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
OPN1SWP03999 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
OPN1SWP03999 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.64■□□□□ 0.89
OPN1SWP03999 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
OPN1SWP03999 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
OPN1SWP03999 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
OPN1SWP03999 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.64■□□□□ 0.89
OPN1SWP03999 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.64■□□□□ 0.89
OPN1SWP03999 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
OPN1SWP03999 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
OPN1SWP03999 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
OPN1SWP03999 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.63■□□□□ 0.89
OPN1SWP03999 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
OPN1SWP03999 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
OPN1SWP03999 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
OPN1SWP03999 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.63■□□□□ 0.89
OPN1SWP03999 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
OPN1SWP03999 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
OPN1SWP03999 AC007375.3-201ENST00000600936 2314 ntBASIC20.63■□□□□ 0.89
OPN1SWP03999 AC137630.3-201ENST00000607245 391 ntBASIC20.63■□□□□ 0.89
OPN1SWP03999 AL031848.2-201ENST00000607670 837 ntBASIC20.63■□□□□ 0.89
OPN1SWP03999 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
OPN1SWP03999 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.63■□□□□ 0.89
OPN1SWP03999 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
OPN1SWP03999 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
OPN1SWP03999 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
OPN1SWP03999 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.62■□□□□ 0.89
OPN1SWP03999 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
OPN1SWP03999 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
OPN1SWP03999 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
OPN1SWP03999 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
OPN1SWP03999 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
OPN1SWP03999 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.62■□□□□ 0.89
OPN1SWP03999 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
OPN1SWP03999 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.62■□□□□ 0.89
OPN1SWP03999 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
OPN1SWP03999 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
OPN1SWP03999 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
OPN1SWP03999 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
OPN1SWP03999 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
OPN1SWP03999 AC087742.1-201ENST00000575880 1738 ntBASIC20.61■□□□□ 0.89
OPN1SWP03999 PKD1P6-201ENST00000343738 4769 ntBASIC20.61■□□□□ 0.89
OPN1SWP03999 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.61■□□□□ 0.89
OPN1SWP03999 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
OPN1SWP03999 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.61■□□□□ 0.89
OPN1SWP03999 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.61■□□□□ 0.89
OPN1SWP03999 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
OPN1SWP03999 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
OPN1SWP03999 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
OPN1SWP03999 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
OPN1SWP03999 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
OPN1SWP03999 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
OPN1SWP03999 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
OPN1SWP03999 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
OPN1SWP03999 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.6■□□□□ 0.89
OPN1SWP03999 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
OPN1SWP03999 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.6■□□□□ 0.89
OPN1SWP03999 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
OPN1SWP03999 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.6■□□□□ 0.89
OPN1SWP03999 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.6■□□□□ 0.89
OPN1SWP03999 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.6■□□□□ 0.89
OPN1SWP03999 AC137767.1-201ENST00000602918 1920 ntBASIC20.6■□□□□ 0.89
OPN1SWP03999 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
OPN1SWP03999 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
OPN1SWP03999 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
OPN1SWP03999 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
OPN1SWP03999 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
OPN1SWP03999 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
OPN1SWP03999 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
OPN1SWP03999 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.59■□□□□ 0.89
OPN1SWP03999 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms